RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 MT1EP04732 61 aa5.01□□□□□ -1.61
AC055811.3-201ENST00000584952 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
AC055811.3-201ENST00000584952 H3BS24 57 aa4.96□□□□□ -1.62
AC055811.3-201ENST00000584952 UQCR11O14957 56 aa4.9□□□□□ -1.63
AC055811.3-201ENST00000584952 MT1GP13640 62 aa4.88□□□□□ -1.63
AC055811.3-201ENST00000584952 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
AC055811.3-201ENST00000584952 V9GYY9 64 aa4.86□□□□□ -1.63
AC055811.3-201ENST00000584952 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
AC055811.3-201ENST00000584952 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
AC055811.3-201ENST00000584952 PCP4P48539 62 aa4.83□□□□□ -1.64
AC055811.3-201ENST00000584952 Q1T7F1 81 aa4.83□□□□□ -1.64
AC055811.3-201ENST00000584952 MT4P47944 62 aa4.82□□□□□ -1.64
AC055811.3-201ENST00000584952 PSPHP1O15172 72 aa4.81□□□□□ -1.64
AC055811.3-201ENST00000584952 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
AC055811.3-201ENST00000584952 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
AC055811.3-201ENST00000584952 MT1MQ8N339 61 aa4.79□□□□□ -1.64
AC055811.3-201ENST00000584952 TNP1P09430 55 aa4.76□□□□□ -1.65
AC055811.3-201ENST00000584952 MT1LQ93083 61 aa4.75□□□□□ -1.65
AC055811.3-201ENST00000584952 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
AC055811.3-201ENST00000584952 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
AC055811.3-201ENST00000584952 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
AC055811.3-201ENST00000584952 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
AC055811.3-201ENST00000584952 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
AC055811.3-201ENST00000584952 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
AC055811.3-201ENST00000584952 K7ERS5 55 aa4.67□□□□□ -1.66
AC055811.3-201ENST00000584952 A6NED7 52 aa4.65□□□□□ -1.67
AC055811.3-201ENST00000584952 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
AC055811.3-201ENST00000584952 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
AC055811.3-201ENST00000584952 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
AC055811.3-201ENST00000584952 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
AC055811.3-201ENST00000584952 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
AC055811.3-201ENST00000584952 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
AC055811.3-201ENST00000584952 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
AC055811.3-201ENST00000584952 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
AC055811.3-201ENST00000584952 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
AC055811.3-201ENST00000584952 ROMO1P60602 79 aa4.4□□□□□ -1.71
AC055811.3-201ENST00000584952 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
AC055811.3-201ENST00000584952 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
AC055811.3-201ENST00000584952 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
AC055811.3-201ENST00000584952 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
AC055811.3-201ENST00000584952 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
AC055811.3-201ENST00000584952 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
AC055811.3-201ENST00000584952 MT1AP04731 61 aa4.03□□□□□ -1.76
AC055811.3-201ENST00000584952 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
AC055811.3-201ENST00000584952 KRTAP5-8O75690 187 aa4□□□□□ -1.77
AC055811.3-201ENST00000584952 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
AC055811.3-201ENST00000584952 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
AC055811.3-201ENST00000584952 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
AC055811.3-201ENST00000584952 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
AC055811.3-201ENST00000584952 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
AC055811.3-201ENST00000584952 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
AC055811.3-201ENST00000584952 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
AC055811.3-201ENST00000584952 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
AC055811.3-201ENST00000584952 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
AC055811.3-201ENST00000584952 MT3P25713 68 aa3.71□□□□□ -1.82
AC055811.3-201ENST00000584952 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
AC055811.3-201ENST00000584952 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
AC055811.3-201ENST00000584952 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
AC055811.3-201ENST00000584952 SVIPQ8NHG7 77 aa3.4□□□□□ -1.87
AC055811.3-201ENST00000584952 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
AC055811.3-201ENST00000584952 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
AC055811.3-201ENST00000584952 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
AC055811.3-201ENST00000584952 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
AC055811.3-201ENST00000584952 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
AC055811.3-201ENST00000584952 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
AC055811.3-201ENST00000584952 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
AC055811.3-201ENST00000584952 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
AC055811.3-201ENST00000584952 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
AC055811.3-201ENST00000584952 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
AC055811.3-201ENST00000584952 NDUFAF8A1L188 74 aa2.66□□□□□ -1.98
AC055811.3-201ENST00000584952 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
AC055811.3-201ENST00000584952 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
AC055811.3-201ENST00000584952 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
AC055811.3-201ENST00000584952 PRM1P04553 51 aa2.26□□□□□ -2.05
AC055811.3-201ENST00000584952 INE1O15225 51 aa2.16□□□□□ -2.06
AC055811.3-201ENST00000584952 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
AC055811.3-201ENST00000584952 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 67.8 ms