RNA–Protein interactions for RNA: ENST00000584866.1

NDEL1-218, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-218ENST00000584866 V9GYY9 64 aa6.94□□□□□ -1.3
NDEL1-218ENST00000584866 K7ERS5 55 aa6.89□□□□□ -1.31
NDEL1-218ENST00000584866 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
NDEL1-218ENST00000584866 Q1T7F1 81 aa6.81□□□□□ -1.32
NDEL1-218ENST00000584866 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
NDEL1-218ENST00000584866 PSPHP1O15172 72 aa6.79□□□□□ -1.32
NDEL1-218ENST00000584866 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
NDEL1-218ENST00000584866 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
NDEL1-218ENST00000584866 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
NDEL1-218ENST00000584866 LCE1DQ5T752 114 aa6.71□□□□□ -1.34
NDEL1-218ENST00000584866 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
NDEL1-218ENST00000584866 MT4P47944 62 aa6.63□□□□□ -1.35
NDEL1-218ENST00000584866 KRTAP5-4Q6L8H1 288 aa6.63□□□□□ -1.35
NDEL1-218ENST00000584866 A6NED7 52 aa6.62□□□□□ -1.35
NDEL1-218ENST00000584866 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
NDEL1-218ENST00000584866 HMCN1Q96RW7 5635 aa6.58□□□□□ -1.36
NDEL1-218ENST00000584866 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
NDEL1-218ENST00000584866 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
NDEL1-218ENST00000584866 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
NDEL1-218ENST00000584866 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
NDEL1-218ENST00000584866 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
NDEL1-218ENST00000584866 PCP4P48539 62 aa6.41□□□□□ -1.38
NDEL1-218ENST00000584866 KRTAP5-5Q701N2 237 aaPredicted RBP6.41□□□□□ -1.38
NDEL1-218ENST00000584866 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
NDEL1-218ENST00000584866 AHNAK2Q8IVF2 5795 aa6.36□□□□□ -1.39
NDEL1-218ENST00000584866 ROMO1P60602 79 aa6.35□□□□□ -1.39
NDEL1-218ENST00000584866 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
NDEL1-218ENST00000584866 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
NDEL1-218ENST00000584866 KRTAP20-2Q3LI61 65 aa6.24□□□□□ -1.41
NDEL1-218ENST00000584866 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
NDEL1-218ENST00000584866 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
NDEL1-218ENST00000584866 KRTAP5-10Q6L8G5 202 aa6.22□□□□□ -1.41
NDEL1-218ENST00000584866 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
NDEL1-218ENST00000584866 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
NDEL1-218ENST00000584866 MT1AP04731 61 aa5.96□□□□□ -1.46
NDEL1-218ENST00000584866 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
NDEL1-218ENST00000584866 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
NDEL1-218ENST00000584866 KRTAP6-1Q3LI64 71 aa5.94□□□□□ -1.46
NDEL1-218ENST00000584866 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
NDEL1-218ENST00000584866 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
NDEL1-218ENST00000584866 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
NDEL1-218ENST00000584866 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
NDEL1-218ENST00000584866 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
NDEL1-218ENST00000584866 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
NDEL1-218ENST00000584866 MT3P25713 68 aa5.45□□□□□ -1.54
NDEL1-218ENST00000584866 PMAIP1Q13794 54 aa5.4□□□□□ -1.54
NDEL1-218ENST00000584866 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
NDEL1-218ENST00000584866 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
NDEL1-218ENST00000584866 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
NDEL1-218ENST00000584866 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
NDEL1-218ENST00000584866 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
NDEL1-218ENST00000584866 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
NDEL1-218ENST00000584866 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
NDEL1-218ENST00000584866 LCE1EQ5T753 118 aa5□□□□□ -1.61
NDEL1-218ENST00000584866 PRO0628Q9UI54 55 aa5□□□□□ -1.61
NDEL1-218ENST00000584866 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
NDEL1-218ENST00000584866 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
NDEL1-218ENST00000584866 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
NDEL1-218ENST00000584866 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
NDEL1-218ENST00000584866 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
NDEL1-218ENST00000584866 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
NDEL1-218ENST00000584866 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
NDEL1-218ENST00000584866 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
NDEL1-218ENST00000584866 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
NDEL1-218ENST00000584866 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
NDEL1-218ENST00000584866 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
NDEL1-218ENST00000584866 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
NDEL1-218ENST00000584866 H3BS24 57 aa3.93□□□□□ -1.78
NDEL1-218ENST00000584866 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
NDEL1-218ENST00000584866 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
NDEL1-218ENST00000584866 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
NDEL1-218ENST00000584866 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
NDEL1-218ENST00000584866 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
NDEL1-218ENST00000584866 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
NDEL1-218ENST00000584866 PRM1P04553 51 aa3.22□□□□□ -1.89
NDEL1-218ENST00000584866 INE1O15225 51 aa2.88□□□□□ -1.95
NDEL1-218ENST00000584866 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
NDEL1-218ENST00000584866 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 101.6 ms