RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
NUP85-217ENST00000581335 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
NUP85-217ENST00000581335 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
NUP85-217ENST00000581335 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
NUP85-217ENST00000581335 SNURFQ9Y675 71 aa3.22□□□□□ -1.89
NUP85-217ENST00000581335 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
NUP85-217ENST00000581335 CYSTM1Q9H1C7 97 aa3.2□□□□□ -1.9
NUP85-217ENST00000581335 A0A0D9SG42 100 aa3.19□□□□□ -1.9
NUP85-217ENST00000581335 MT1GP13640 62 aa3.19□□□□□ -1.9
NUP85-217ENST00000581335 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
NUP85-217ENST00000581335 ANAPC13Q9BS18 74 aa3.19□□□□□ -1.9
NUP85-217ENST00000581335 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
NUP85-217ENST00000581335 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
NUP85-217ENST00000581335 SPATA8Q6RVD6 105 aa3.14□□□□□ -1.91
NUP85-217ENST00000581335 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
NUP85-217ENST00000581335 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
NUP85-217ENST00000581335 SERP1Q9Y6X1 66 aa3.14□□□□□ -1.91
NUP85-217ENST00000581335 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
NUP85-217ENST00000581335 K7ERU9 68 aa3.12□□□□□ -1.91
NUP85-217ENST00000581335 MT4P47944 62 aa3.12□□□□□ -1.91
NUP85-217ENST00000581335 COA5Q86WW8 74 aa3.12□□□□□ -1.91
NUP85-217ENST00000581335 MT1MQ8N339 61 aa3.12□□□□□ -1.91
NUP85-217ENST00000581335 A0A1B0GU33 70 aa3.1□□□□□ -1.91
NUP85-217ENST00000581335 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
NUP85-217ENST00000581335 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
NUP85-217ENST00000581335 MT1LQ93083 61 aa3.1□□□□□ -1.91
NUP85-217ENST00000581335 K7ERS5 55 aa3.08□□□□□ -1.92
NUP85-217ENST00000581335 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
NUP85-217ENST00000581335 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
NUP85-217ENST00000581335 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
NUP85-217ENST00000581335 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
NUP85-217ENST00000581335 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
NUP85-217ENST00000581335 TNP1P09430 55 aa3□□□□□ -1.93
NUP85-217ENST00000581335 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
NUP85-217ENST00000581335 A6NED7 52 aa2.99□□□□□ -1.93
NUP85-217ENST00000581335 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
NUP85-217ENST00000581335 A0A1B0GU69 56 aa2.98□□□□□ -1.93
NUP85-217ENST00000581335 COX7CP15954 63 aa2.97□□□□□ -1.93
NUP85-217ENST00000581335 H7BZZ5 65 aa2.96□□□□□ -1.94
NUP85-217ENST00000581335 KRTAP5-7Q6L8G8 165 aa2.93□□□□□ -1.94
NUP85-217ENST00000581335 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
NUP85-217ENST00000581335 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
NUP85-217ENST00000581335 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
NUP85-217ENST00000581335 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
NUP85-217ENST00000581335 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
NUP85-217ENST00000581335 PRR15LQ9BU68 103 aa2.84□□□□□ -1.95
NUP85-217ENST00000581335 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
NUP85-217ENST00000581335 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
NUP85-217ENST00000581335 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
NUP85-217ENST00000581335 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
NUP85-217ENST00000581335 UQCR11O14957 56 aa2.75□□□□□ -1.97
NUP85-217ENST00000581335 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
NUP85-217ENST00000581335 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
NUP85-217ENST00000581335 CCDC179H3BU77 68 aa2.73□□□□□ -1.97
NUP85-217ENST00000581335 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
NUP85-217ENST00000581335 MT1AP04731 61 aa2.64□□□□□ -1.99
NUP85-217ENST00000581335 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
NUP85-217ENST00000581335 TMEM258P61165 79 aa2.61□□□□□ -1.99
NUP85-217ENST00000581335 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
NUP85-217ENST00000581335 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
NUP85-217ENST00000581335 Q1T7F1 81 aa2.5□□□□□ -2.01
NUP85-217ENST00000581335 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
NUP85-217ENST00000581335 RPS28P62857 69 aaKnown RBP2.48□□□□□ -2.01
NUP85-217ENST00000581335 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
NUP85-217ENST00000581335 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
NUP85-217ENST00000581335 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
NUP85-217ENST00000581335 ROMO1P60602 79 aa2.43□□□□□ -2.02
NUP85-217ENST00000581335 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
NUP85-217ENST00000581335 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
NUP85-217ENST00000581335 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
NUP85-217ENST00000581335 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
NUP85-217ENST00000581335 INE1O15225 51 aa1.91□□□□□ -2.1
NUP85-217ENST00000581335 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
NUP85-217ENST00000581335 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
NUP85-217ENST00000581335 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
NUP85-217ENST00000581335 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
NUP85-217ENST00000581335 PRM1P04553 51 aa1.24□□□□□ -2.21
NUP85-217ENST00000581335 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 83.2 ms