RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CSNK1D-213ENST00000580446 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
CSNK1D-213ENST00000580446 TRAV7A0A075B6U4 112 aa4.43□□□□□ -1.7
CSNK1D-213ENST00000580446 H0Y9P7 68 aa4.4□□□□□ -1.71
CSNK1D-213ENST00000580446 TMEM258P61165 79 aa4.4□□□□□ -1.71
CSNK1D-213ENST00000580446 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
CSNK1D-213ENST00000580446 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
CSNK1D-213ENST00000580446 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
CSNK1D-213ENST00000580446 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
CSNK1D-213ENST00000580446 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
CSNK1D-213ENST00000580446 OCR1Q9BZK8 76 aa4.29□□□□□ -1.72
CSNK1D-213ENST00000580446 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
CSNK1D-213ENST00000580446 H7BZZ5 65 aa4.27□□□□□ -1.73
CSNK1D-213ENST00000580446 SNURFQ9Y675 71 aa4.27□□□□□ -1.73
CSNK1D-213ENST00000580446 H3BPC8 53 aa4.25□□□□□ -1.73
CSNK1D-213ENST00000580446 MP68P56378 58 aa4.25□□□□□ -1.73
CSNK1D-213ENST00000580446 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
CSNK1D-213ENST00000580446 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
CSNK1D-213ENST00000580446 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
CSNK1D-213ENST00000580446 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
CSNK1D-213ENST00000580446 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
CSNK1D-213ENST00000580446 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
CSNK1D-213ENST00000580446 SPANXA2-OT1Q8N9U9 137 aa4.14□□□□□ -1.75
CSNK1D-213ENST00000580446 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
CSNK1D-213ENST00000580446 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
CSNK1D-213ENST00000580446 V9GYY9 64 aa4.1□□□□□ -1.75
CSNK1D-213ENST00000580446 MT1AP04731 61 aa4.09□□□□□ -1.75
CSNK1D-213ENST00000580446 Q1T7F1 81 aa4.05□□□□□ -1.76
CSNK1D-213ENST00000580446 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
CSNK1D-213ENST00000580446 ACYP2P14621 99 aa4.01□□□□□ -1.77
CSNK1D-213ENST00000580446 COA5Q86WW8 74 aa3.99□□□□□ -1.77
CSNK1D-213ENST00000580446 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
CSNK1D-213ENST00000580446 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
CSNK1D-213ENST00000580446 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
CSNK1D-213ENST00000580446 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
CSNK1D-213ENST00000580446 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
CSNK1D-213ENST00000580446 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
CSNK1D-213ENST00000580446 TNP1P09430 55 aa3.93□□□□□ -1.78
CSNK1D-213ENST00000580446 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
CSNK1D-213ENST00000580446 PSPHP1O15172 72 aa3.92□□□□□ -1.78
CSNK1D-213ENST00000580446 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
CSNK1D-213ENST00000580446 PRR15LQ9BU68 103 aa3.91□□□□□ -1.78
CSNK1D-213ENST00000580446 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
CSNK1D-213ENST00000580446 A6NED7 52 aa3.85□□□□□ -1.79
CSNK1D-213ENST00000580446 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
CSNK1D-213ENST00000580446 A0A1B0GU69 56 aa3.81□□□□□ -1.8
CSNK1D-213ENST00000580446 SEC61GP60059 68 aa3.79□□□□□ -1.8
CSNK1D-213ENST00000580446 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
CSNK1D-213ENST00000580446 UQCR11O14957 56 aa3.75□□□□□ -1.81
CSNK1D-213ENST00000580446 MT3P25713 68 aa3.74□□□□□ -1.81
CSNK1D-213ENST00000580446 MIR22HGQ0VDD5 57 aa3.7□□□□□ -1.82
CSNK1D-213ENST00000580446 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CSNK1D-213ENST00000580446 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
CSNK1D-213ENST00000580446 A0A1B0GU33 70 aa3.67□□□□□ -1.82
CSNK1D-213ENST00000580446 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
CSNK1D-213ENST00000580446 A8MU10 97 aa3.66□□□□□ -1.82
CSNK1D-213ENST00000580446 KTN1-AS1Q86SY8 53 aa3.66□□□□□ -1.82
CSNK1D-213ENST00000580446 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
CSNK1D-213ENST00000580446 K7ERS5 55 aa3.59□□□□□ -1.83
CSNK1D-213ENST00000580446 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CSNK1D-213ENST00000580446 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
CSNK1D-213ENST00000580446 PRAC1Q96KF2 57 aa3.42□□□□□ -1.86
CSNK1D-213ENST00000580446 ROMO1P60602 79 aa3.39□□□□□ -1.87
CSNK1D-213ENST00000580446 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
CSNK1D-213ENST00000580446 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
CSNK1D-213ENST00000580446 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CSNK1D-213ENST00000580446 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CSNK1D-213ENST00000580446 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
CSNK1D-213ENST00000580446 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CSNK1D-213ENST00000580446 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
CSNK1D-213ENST00000580446 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CSNK1D-213ENST00000580446 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
CSNK1D-213ENST00000580446 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CSNK1D-213ENST00000580446 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
CSNK1D-213ENST00000580446 INE1O15225 51 aa2.46□□□□□ -2.02
CSNK1D-213ENST00000580446 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
CSNK1D-213ENST00000580446 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
CSNK1D-213ENST00000580446 PRM1P04553 51 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms