RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
CDK5RAP3-213ENST00000579605 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
CDK5RAP3-213ENST00000579605 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
CDK5RAP3-213ENST00000579605 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
CDK5RAP3-213ENST00000579605 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
CDK5RAP3-213ENST00000579605 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
CDK5RAP3-213ENST00000579605 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
CDK5RAP3-213ENST00000579605 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
CDK5RAP3-213ENST00000579605 TNP1P09430 55 aa4.39□□□□□ -1.71
CDK5RAP3-213ENST00000579605 A0A1B0GU69 56 aa4.37□□□□□ -1.71
CDK5RAP3-213ENST00000579605 A8MU10 97 aa4.36□□□□□ -1.71
CDK5RAP3-213ENST00000579605 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
CDK5RAP3-213ENST00000579605 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
CDK5RAP3-213ENST00000579605 COX7CP15954 63 aa4.33□□□□□ -1.72
CDK5RAP3-213ENST00000579605 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
CDK5RAP3-213ENST00000579605 H7BZZ5 65 aa4.31□□□□□ -1.72
CDK5RAP3-213ENST00000579605 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CDK5RAP3-213ENST00000579605 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
CDK5RAP3-213ENST00000579605 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
CDK5RAP3-213ENST00000579605 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
CDK5RAP3-213ENST00000579605 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
CDK5RAP3-213ENST00000579605 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
CDK5RAP3-213ENST00000579605 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
CDK5RAP3-213ENST00000579605 LINC01558Q9Y6Z2 57 aa4.06□□□□□ -1.76
CDK5RAP3-213ENST00000579605 UQCR11O14957 56 aa4.02□□□□□ -1.77
CDK5RAP3-213ENST00000579605 ATP5EP56381 51 aaPredicted RBP4.02□□□□□ -1.77
CDK5RAP3-213ENST00000579605 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
CDK5RAP3-213ENST00000579605 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
CDK5RAP3-213ENST00000579605 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
CDK5RAP3-213ENST00000579605 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
CDK5RAP3-213ENST00000579605 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
CDK5RAP3-213ENST00000579605 K7ERS5 55 aa3.91□□□□□ -1.78
CDK5RAP3-213ENST00000579605 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
CDK5RAP3-213ENST00000579605 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
CDK5RAP3-213ENST00000579605 MT1AP04731 61 aa3.88□□□□□ -1.79
CDK5RAP3-213ENST00000579605 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CDK5RAP3-213ENST00000579605 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
CDK5RAP3-213ENST00000579605 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
CDK5RAP3-213ENST00000579605 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
CDK5RAP3-213ENST00000579605 TMEM258P61165 79 aa3.82□□□□□ -1.8
CDK5RAP3-213ENST00000579605 PCP4P48539 62 aa3.73□□□□□ -1.81
CDK5RAP3-213ENST00000579605 PSPHP1O15172 72 aa3.72□□□□□ -1.81
CDK5RAP3-213ENST00000579605 V9GYY9 64 aa3.7□□□□□ -1.82
CDK5RAP3-213ENST00000579605 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
CDK5RAP3-213ENST00000579605 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
CDK5RAP3-213ENST00000579605 RPS28P62857 69 aaKnown RBP3.64□□□□□ -1.83
CDK5RAP3-213ENST00000579605 Q1T7F1 81 aa3.64□□□□□ -1.83
CDK5RAP3-213ENST00000579605 MT3P25713 68 aa3.6□□□□□ -1.83
CDK5RAP3-213ENST00000579605 A6NED7 52 aa3.59□□□□□ -1.83
CDK5RAP3-213ENST00000579605 ROMO1P60602 79 aa3.57□□□□□ -1.84
CDK5RAP3-213ENST00000579605 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
CDK5RAP3-213ENST00000579605 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
CDK5RAP3-213ENST00000579605 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
CDK5RAP3-213ENST00000579605 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
CDK5RAP3-213ENST00000579605 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
CDK5RAP3-213ENST00000579605 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
CDK5RAP3-213ENST00000579605 H3BS24 57 aa3.11□□□□□ -1.91
CDK5RAP3-213ENST00000579605 BRK1Q8WUW1 75 aa3.1□□□□□ -1.91
CDK5RAP3-213ENST00000579605 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CDK5RAP3-213ENST00000579605 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CDK5RAP3-213ENST00000579605 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
CDK5RAP3-213ENST00000579605 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
CDK5RAP3-213ENST00000579605 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
CDK5RAP3-213ENST00000579605 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
CDK5RAP3-213ENST00000579605 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CDK5RAP3-213ENST00000579605 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
CDK5RAP3-213ENST00000579605 SVIPQ8NHG7 77 aa2.6□□□□□ -1.99
CDK5RAP3-213ENST00000579605 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
CDK5RAP3-213ENST00000579605 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CDK5RAP3-213ENST00000579605 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CDK5RAP3-213ENST00000579605 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
CDK5RAP3-213ENST00000579605 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CDK5RAP3-213ENST00000579605 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
CDK5RAP3-213ENST00000579605 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
CDK5RAP3-213ENST00000579605 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
CDK5RAP3-213ENST00000579605 PRM1P04553 51 aa1.82□□□□□ -2.12
CDK5RAP3-213ENST00000579605 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
CDK5RAP3-213ENST00000579605 INE1O15225 51 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 156.7 ms