RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 RYR3Q15413 4870 aa2.25□□□□□ -2.05
DDX42-210ENST00000579539 HERC1Q15751 4861 aa2.24□□□□□ -2.05
DDX42-210ENST00000579539 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
DDX42-210ENST00000579539 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
DDX42-210ENST00000579539 BIRC6Q9NR09 4857 aa2.22□□□□□ -2.05
DDX42-210ENST00000579539 MUC2Q02817 5179 aa2.21□□□□□ -2.05
DDX42-210ENST00000579539 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
DDX42-210ENST00000579539 MUC17Q685J3 4493 aa2.17□□□□□ -2.06
DDX42-210ENST00000579539 LRP2P98164 4655 aa2.17□□□□□ -2.06
DDX42-210ENST00000579539 EPPK1P58107 5090 aaKnown RBP2.17□□□□□ -2.06
DDX42-210ENST00000579539 KRTAP21-3Q3LHN1 58 aa2.15□□□□□ -2.07
DDX42-210ENST00000579539 LPAP08519 4548 aa2.15□□□□□ -2.07
DDX42-210ENST00000579539 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
DDX42-210ENST00000579539 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
DDX42-210ENST00000579539 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
DDX42-210ENST00000579539 KMT2CQ8NEZ4 4911 aaKnown RBP2.13□□□□□ -2.07
DDX42-210ENST00000579539 RYR2Q92736 4967 aa2.11□□□□□ -2.07
DDX42-210ENST00000579539 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
DDX42-210ENST00000579539 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
DDX42-210ENST00000579539 M0R2T5 61 aa2.1□□□□□ -2.07
DDX42-210ENST00000579539 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
DDX42-210ENST00000579539 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
DDX42-210ENST00000579539 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
DDX42-210ENST00000579539 MT1XP80297 61 aa2.01□□□□□ -2.09
DDX42-210ENST00000579539 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
DDX42-210ENST00000579539 ABCA13Q86UQ4 5058 aa1.99□□□□□ -2.09
DDX42-210ENST00000579539 HERC2O95714 4834 aa1.96□□□□□ -2.1
DDX42-210ENST00000579539 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
DDX42-210ENST00000579539 FSIP2Q5CZC0 6907 aa1.94□□□□□ -2.1
DDX42-210ENST00000579539 MT1BP07438 61 aa1.94□□□□□ -2.1
DDX42-210ENST00000579539 MT2AP02795 61 aa1.93□□□□□ -2.1
DDX42-210ENST00000579539 KRTAP12-4P60329 112 aa1.93□□□□□ -2.1
DDX42-210ENST00000579539 MT1EP04732 61 aa1.89□□□□□ -2.11
DDX42-210ENST00000579539 MT1FP04733 61 aa1.89□□□□□ -2.11
DDX42-210ENST00000579539 NEBP20929 6669 aa1.87□□□□□ -2.11
DDX42-210ENST00000579539 HMCN2Q8NDA2 5059 aa1.87□□□□□ -2.11
DDX42-210ENST00000579539 MT1HP80294 61 aa1.87□□□□□ -2.11
DDX42-210ENST00000579539 MT1LQ93083 61 aa1.86□□□□□ -2.11
DDX42-210ENST00000579539 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
DDX42-210ENST00000579539 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
DDX42-210ENST00000579539 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
DDX42-210ENST00000579539 MT1AP04731 61 aa1.83□□□□□ -2.12
DDX42-210ENST00000579539 MACF1Q9UPN3 7388 aaKnown RBP1.81□□□□□ -2.12
DDX42-210ENST00000579539 KRTAP19-7Q3SYF9 63 aa1.78□□□□□ -2.12
DDX42-210ENST00000579539 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
DDX42-210ENST00000579539 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
DDX42-210ENST00000579539 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
DDX42-210ENST00000579539 MT1GP13640 62 aa1.7□□□□□ -2.14
DDX42-210ENST00000579539 SSPOA2VEC9 5147 aa1.7□□□□□ -2.14
DDX42-210ENST00000579539 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
DDX42-210ENST00000579539 PRM1P04553 51 aa1.67□□□□□ -2.14
DDX42-210ENST00000579539 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
DDX42-210ENST00000579539 MT1MQ8N339 61 aa1.61□□□□□ -2.15
DDX42-210ENST00000579539 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
DDX42-210ENST00000579539 SPRR2FQ96RM1 72 aa1.6□□□□□ -2.15
DDX42-210ENST00000579539 KMT2DO14686 5537 aa1.58□□□□□ -2.16
DDX42-210ENST00000579539 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
DDX42-210ENST00000579539 SPRR2AP35326 72 aa1.57□□□□□ -2.16
DDX42-210ENST00000579539 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
DDX42-210ENST00000579539 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
DDX42-210ENST00000579539 SPRR2BP35325 72 aa1.52□□□□□ -2.17
DDX42-210ENST00000579539 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
DDX42-210ENST00000579539 SPRR2EP22531 72 aa1.48□□□□□ -2.17
DDX42-210ENST00000579539 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
DDX42-210ENST00000579539 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
DDX42-210ENST00000579539 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
DDX42-210ENST00000579539 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
DDX42-210ENST00000579539 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
DDX42-210ENST00000579539 SPRR2DP22532 72 aa1.44□□□□□ -2.18
DDX42-210ENST00000579539 USH2AO75445 5202 aa1.43□□□□□ -2.18
DDX42-210ENST00000579539 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
DDX42-210ENST00000579539 MUC5ACP98088 5654 aa1.34□□□□□ -2.19
DDX42-210ENST00000579539 MDN1Q9NU22 5596 aa1.34□□□□□ -2.19
DDX42-210ENST00000579539 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
DDX42-210ENST00000579539 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
DDX42-210ENST00000579539 MT4P47944 62 aa0.86□□□□□ -2.27
DDX42-210ENST00000579539 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
DDX42-210ENST00000579539 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 55 ms