RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 A0A0D9SG42 100 aa5.08□□□□□ -1.6
CCDC57-211ENST00000578187 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
CCDC57-211ENST00000578187 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
CCDC57-211ENST00000578187 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
CCDC57-211ENST00000578187 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
CCDC57-211ENST00000578187 Q1T7F1 81 aa5□□□□□ -1.61
CCDC57-211ENST00000578187 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
CCDC57-211ENST00000578187 PRO0628Q9UI54 55 aa5□□□□□ -1.61
CCDC57-211ENST00000578187 A8MU10 97 aa4.96□□□□□ -1.62
CCDC57-211ENST00000578187 UQCR11O14957 56 aa4.87□□□□□ -1.63
CCDC57-211ENST00000578187 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
CCDC57-211ENST00000578187 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
CCDC57-211ENST00000578187 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
CCDC57-211ENST00000578187 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
CCDC57-211ENST00000578187 PSPHP1O15172 72 aa4.74□□□□□ -1.65
CCDC57-211ENST00000578187 MT1EP04732 61 aa4.74□□□□□ -1.65
CCDC57-211ENST00000578187 TNP1P09430 55 aa4.73□□□□□ -1.65
CCDC57-211ENST00000578187 MT3P25713 68 aa4.72□□□□□ -1.65
CCDC57-211ENST00000578187 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
CCDC57-211ENST00000578187 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
CCDC57-211ENST00000578187 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
CCDC57-211ENST00000578187 A6NED7 52 aa4.67□□□□□ -1.66
CCDC57-211ENST00000578187 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
CCDC57-211ENST00000578187 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
CCDC57-211ENST00000578187 DSTQ03001 7570 aaKnown RBP4.65□□□□□ -1.67
CCDC57-211ENST00000578187 K7ERS5 55 aa4.64□□□□□ -1.67
CCDC57-211ENST00000578187 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
CCDC57-211ENST00000578187 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
CCDC57-211ENST00000578187 MT1GP13640 62 aa4.6□□□□□ -1.67
CCDC57-211ENST00000578187 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
CCDC57-211ENST00000578187 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
CCDC57-211ENST00000578187 MT1LQ93083 61 aa4.55□□□□□ -1.68
CCDC57-211ENST00000578187 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
CCDC57-211ENST00000578187 MT1MQ8N339 61 aa4.5□□□□□ -1.69
CCDC57-211ENST00000578187 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
CCDC57-211ENST00000578187 NDUFAF8A1L188 74 aa4.47□□□□□ -1.69
CCDC57-211ENST00000578187 MT4P47944 62 aa4.46□□□□□ -1.7
CCDC57-211ENST00000578187 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
CCDC57-211ENST00000578187 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
CCDC57-211ENST00000578187 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CCDC57-211ENST00000578187 ROMO1P60602 79 aa4.35□□□□□ -1.71
CCDC57-211ENST00000578187 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
CCDC57-211ENST00000578187 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
CCDC57-211ENST00000578187 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
CCDC57-211ENST00000578187 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
CCDC57-211ENST00000578187 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CCDC57-211ENST00000578187 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
CCDC57-211ENST00000578187 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
CCDC57-211ENST00000578187 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
CCDC57-211ENST00000578187 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
CCDC57-211ENST00000578187 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
CCDC57-211ENST00000578187 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
CCDC57-211ENST00000578187 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
CCDC57-211ENST00000578187 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
CCDC57-211ENST00000578187 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
CCDC57-211ENST00000578187 MT1AP04731 61 aa3.88□□□□□ -1.79
CCDC57-211ENST00000578187 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
CCDC57-211ENST00000578187 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
CCDC57-211ENST00000578187 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
CCDC57-211ENST00000578187 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
CCDC57-211ENST00000578187 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
CCDC57-211ENST00000578187 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CCDC57-211ENST00000578187 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
CCDC57-211ENST00000578187 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
CCDC57-211ENST00000578187 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
CCDC57-211ENST00000578187 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
CCDC57-211ENST00000578187 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
CCDC57-211ENST00000578187 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
CCDC57-211ENST00000578187 INE1O15225 51 aa3.14□□□□□ -1.91
CCDC57-211ENST00000578187 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
CCDC57-211ENST00000578187 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CCDC57-211ENST00000578187 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
CCDC57-211ENST00000578187 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
CCDC57-211ENST00000578187 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CCDC57-211ENST00000578187 PRM1P04553 51 aa2.24□□□□□ -2.05
CCDC57-211ENST00000578187 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
CCDC57-211ENST00000578187 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CCDC57-211ENST00000578187 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 95 ms