RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
VAPA-204ENST00000577901 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.41
VAPA-204ENST00000577901 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
VAPA-204ENST00000577901 A8MU10 97 aa6.17□□□□□ -1.42
VAPA-204ENST00000577901 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
VAPA-204ENST00000577901 UQCR11O14957 56 aa6.06□□□□□ -1.44
VAPA-204ENST00000577901 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
VAPA-204ENST00000577901 V9GYY9 64 aa5.98□□□□□ -1.45
VAPA-204ENST00000577901 Q1T7F1 81 aa5.96□□□□□ -1.46
VAPA-204ENST00000577901 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
VAPA-204ENST00000577901 TNP1P09430 55 aa5.95□□□□□ -1.46
VAPA-204ENST00000577901 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
VAPA-204ENST00000577901 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
VAPA-204ENST00000577901 MT1EP04732 61 aa5.93□□□□□ -1.46
VAPA-204ENST00000577901 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
VAPA-204ENST00000577901 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
VAPA-204ENST00000577901 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.91□□□□□ -1.46
VAPA-204ENST00000577901 PSPHP1O15172 72 aa5.9□□□□□ -1.46
VAPA-204ENST00000577901 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
VAPA-204ENST00000577901 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
VAPA-204ENST00000577901 A0A0A0MQY5 61 aa5.85□□□□□ -1.47
VAPA-204ENST00000577901 K7ERS5 55 aa5.84□□□□□ -1.47
VAPA-204ENST00000577901 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
VAPA-204ENST00000577901 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
VAPA-204ENST00000577901 MT1GP13640 62 aa5.77□□□□□ -1.49
VAPA-204ENST00000577901 MT4P47944 62 aa5.76□□□□□ -1.49
VAPA-204ENST00000577901 A6NED7 52 aa5.72□□□□□ -1.49
VAPA-204ENST00000577901 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
VAPA-204ENST00000577901 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
VAPA-204ENST00000577901 MT1MQ8N339 61 aa5.67□□□□□ -1.5
VAPA-204ENST00000577901 MT1LQ93083 61 aa5.66□□□□□ -1.5
VAPA-204ENST00000577901 KRTAP5-11Q6L8G4 156 aa5.65□□□□□ -1.5
VAPA-204ENST00000577901 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
VAPA-204ENST00000577901 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
VAPA-204ENST00000577901 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
VAPA-204ENST00000577901 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
VAPA-204ENST00000577901 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
VAPA-204ENST00000577901 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
VAPA-204ENST00000577901 ROMO1P60602 79 aa5.42□□□□□ -1.54
VAPA-204ENST00000577901 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
VAPA-204ENST00000577901 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
VAPA-204ENST00000577901 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
VAPA-204ENST00000577901 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
VAPA-204ENST00000577901 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
VAPA-204ENST00000577901 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
VAPA-204ENST00000577901 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
VAPA-204ENST00000577901 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
VAPA-204ENST00000577901 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
VAPA-204ENST00000577901 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
VAPA-204ENST00000577901 PRO0628Q9UI54 55 aa5.02□□□□□ -1.61
VAPA-204ENST00000577901 KRTAP4-4Q9BYR3 166 aa4.9□□□□□ -1.63
VAPA-204ENST00000577901 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
VAPA-204ENST00000577901 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
VAPA-204ENST00000577901 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
VAPA-204ENST00000577901 MT1AP04731 61 aa4.83□□□□□ -1.64
VAPA-204ENST00000577901 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
VAPA-204ENST00000577901 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
VAPA-204ENST00000577901 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
VAPA-204ENST00000577901 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
VAPA-204ENST00000577901 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
VAPA-204ENST00000577901 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
VAPA-204ENST00000577901 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
VAPA-204ENST00000577901 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
VAPA-204ENST00000577901 MT3P25713 68 aa4.44□□□□□ -1.7
VAPA-204ENST00000577901 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
VAPA-204ENST00000577901 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
VAPA-204ENST00000577901 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
VAPA-204ENST00000577901 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
VAPA-204ENST00000577901 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
VAPA-204ENST00000577901 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
VAPA-204ENST00000577901 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
VAPA-204ENST00000577901 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
VAPA-204ENST00000577901 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
VAPA-204ENST00000577901 INE1O15225 51 aa2.95□□□□□ -1.94
VAPA-204ENST00000577901 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
VAPA-204ENST00000577901 PRM1P04553 51 aa2.76□□□□□ -1.97
VAPA-204ENST00000577901 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
VAPA-204ENST00000577901 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 169.4 ms