RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
BRIP1-202ENST00000577598 RYR1P21817 5038 aa1.2□□□□□ -2.22
BRIP1-202ENST00000577598 DNHD1Q96M86 4753 aa1.2□□□□□ -2.22
BRIP1-202ENST00000577598 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
BRIP1-202ENST00000577598 HERC2O95714 4834 aa1.18□□□□□ -2.22
BRIP1-202ENST00000577598 KMT2CQ8NEZ4 4911 aaKnown RBP1.18□□□□□ -2.22
BRIP1-202ENST00000577598 RYR3Q15413 4870 aa1.16□□□□□ -2.22
BRIP1-202ENST00000577598 RYR2Q92736 4967 aa1.15□□□□□ -2.22
BRIP1-202ENST00000577598 LRP2P98164 4655 aa1.15□□□□□ -2.22
BRIP1-202ENST00000577598 KRTAP5-5Q701N2 237 aaPredicted RBP1.14□□□□□ -2.23
BRIP1-202ENST00000577598 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
BRIP1-202ENST00000577598 LPAP08519 4548 aa1.13□□□□□ -2.23
BRIP1-202ENST00000577598 MT1HL1P0DM35 61 aa1.12□□□□□ -2.23
BRIP1-202ENST00000577598 CRCT1Q9UGL9 99 aa1.1□□□□□ -2.23
BRIP1-202ENST00000577598 KRTAP5-2Q701N4 177 aa1.1□□□□□ -2.23
BRIP1-202ENST00000577598 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
BRIP1-202ENST00000577598 KRTAP5-4Q6L8H1 288 aa1.09□□□□□ -2.23
BRIP1-202ENST00000577598 KRTAP5-9P26371 169 aa1.09□□□□□ -2.23
BRIP1-202ENST00000577598 HERC1Q15751 4861 aa1.09□□□□□ -2.24
BRIP1-202ENST00000577598 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
BRIP1-202ENST00000577598 KRTAP19-2Q3LHN2 52 aa1.08□□□□□ -2.24
BRIP1-202ENST00000577598 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
BRIP1-202ENST00000577598 ABCA13Q86UQ4 5058 aa1.06□□□□□ -2.24
BRIP1-202ENST00000577598 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
BRIP1-202ENST00000577598 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
BRIP1-202ENST00000577598 EPPK1P58107 5090 aaKnown RBP1.03□□□□□ -2.25
BRIP1-202ENST00000577598 NEBP20929 6669 aa1.02□□□□□ -2.25
BRIP1-202ENST00000577598 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
BRIP1-202ENST00000577598 KRTAP4-1Q9BYQ7 146 aa1.01□□□□□ -2.25
BRIP1-202ENST00000577598 SPRR2GQ9BYE4 73 aa1□□□□□ -2.25
BRIP1-202ENST00000577598 KRTAP19-8Q3LI54 63 aa0.99□□□□□ -2.25
BRIP1-202ENST00000577598 FAT4Q6V0I7 4981 aa0.98□□□□□ -2.25
BRIP1-202ENST00000577598 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
BRIP1-202ENST00000577598 SSPOA2VEC9 5147 aa0.97□□□□□ -2.25
BRIP1-202ENST00000577598 SPRR2DP22532 72 aa0.97□□□□□ -2.25
BRIP1-202ENST00000577598 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
BRIP1-202ENST00000577598 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
BRIP1-202ENST00000577598 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
BRIP1-202ENST00000577598 HMCN2Q8NDA2 5059 aa0.94□□□□□ -2.26
BRIP1-202ENST00000577598 MUC2Q02817 5179 aa0.94□□□□□ -2.26
BRIP1-202ENST00000577598 MT1HP80294 61 aa0.94□□□□□ -2.26
BRIP1-202ENST00000577598 KRTAP4-3Q9BYR4 195 aa0.91□□□□□ -2.26
BRIP1-202ENST00000577598 MT2AP02795 61 aa0.91□□□□□ -2.26
BRIP1-202ENST00000577598 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.26
BRIP1-202ENST00000577598 KRTAP19-6Q3LI70 58 aa0.9□□□□□ -2.27
BRIP1-202ENST00000577598 MT1XP80297 61 aa0.89□□□□□ -2.27
BRIP1-202ENST00000577598 MT1BP07438 61 aa0.89□□□□□ -2.27
BRIP1-202ENST00000577598 MT1FP04733 61 aa0.88□□□□□ -2.27
BRIP1-202ENST00000577598 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
BRIP1-202ENST00000577598 MACF1Q9UPN3 7388 aaKnown RBP0.88□□□□□ -2.27
BRIP1-202ENST00000577598 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
BRIP1-202ENST00000577598 RNF213Q63HN8 5207 aa0.87□□□□□ -2.27
BRIP1-202ENST00000577598 KRTAP5-8O75690 187 aa0.86□□□□□ -2.27
BRIP1-202ENST00000577598 MT1GP13640 62 aa0.85□□□□□ -2.27
BRIP1-202ENST00000577598 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
BRIP1-202ENST00000577598 MT1EP04732 61 aa0.82□□□□□ -2.28
BRIP1-202ENST00000577598 MT1LQ93083 61 aa0.82□□□□□ -2.28
BRIP1-202ENST00000577598 KRTAP19-7Q3SYF9 63 aa0.81□□□□□ -2.28
BRIP1-202ENST00000577598 USH2AO75445 5202 aa0.81□□□□□ -2.28
BRIP1-202ENST00000577598 KRTAP5-10Q6L8G5 202 aa0.81□□□□□ -2.28
BRIP1-202ENST00000577598 SPRR2FQ96RM1 72 aa0.79□□□□□ -2.28
BRIP1-202ENST00000577598 SPRR2AP35326 72 aa0.78□□□□□ -2.28
BRIP1-202ENST00000577598 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.29
BRIP1-202ENST00000577598 SPRR2BP35325 72 aa0.77□□□□□ -2.29
BRIP1-202ENST00000577598 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
BRIP1-202ENST00000577598 KMT2DO14686 5537 aa0.77□□□□□ -2.29
BRIP1-202ENST00000577598 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
BRIP1-202ENST00000577598 MT1MQ8N339 61 aa0.76□□□□□ -2.29
BRIP1-202ENST00000577598 SPRR2EP22531 72 aa0.75□□□□□ -2.29
BRIP1-202ENST00000577598 MT1AP04731 61 aa0.74□□□□□ -2.29
BRIP1-202ENST00000577598 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
BRIP1-202ENST00000577598 MUC12Q9UKN1 5478 aa0.66□□□□□ -2.3
BRIP1-202ENST00000577598 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
BRIP1-202ENST00000577598 KRTAP20-2Q3LI61 65 aa0.57□□□□□ -2.32
BRIP1-202ENST00000577598 MT4P47944 62 aa0.55□□□□□ -2.32
BRIP1-202ENST00000577598 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
BRIP1-202ENST00000577598 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 13.8 ms