RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 ANAPC13Q9BS18 74 aa6.99□□□□□ -1.29
ABR-233ENST00000575934 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
ABR-233ENST00000575934 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
ABR-233ENST00000575934 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
ABR-233ENST00000575934 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
ABR-233ENST00000575934 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
ABR-233ENST00000575934 LINC01558Q9Y6Z2 57 aa6.88□□□□□ -1.31
ABR-233ENST00000575934 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
ABR-233ENST00000575934 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
ABR-233ENST00000575934 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
ABR-233ENST00000575934 UQCR11O14957 56 aa6.73□□□□□ -1.33
ABR-233ENST00000575934 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
ABR-233ENST00000575934 KRTAP20-2Q3LI61 65 aa6.67□□□□□ -1.34
ABR-233ENST00000575934 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
ABR-233ENST00000575934 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
ABR-233ENST00000575934 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
ABR-233ENST00000575934 KRTAP5-7Q6L8G8 165 aa6.62□□□□□ -1.35
ABR-233ENST00000575934 TMEM258P61165 79 aa6.61□□□□□ -1.35
ABR-233ENST00000575934 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
ABR-233ENST00000575934 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
ABR-233ENST00000575934 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
ABR-233ENST00000575934 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
ABR-233ENST00000575934 K7ERS5 55 aa6.45□□□□□ -1.38
ABR-233ENST00000575934 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
ABR-233ENST00000575934 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
ABR-233ENST00000575934 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
ABR-233ENST00000575934 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
ABR-233ENST00000575934 PSPHP1O15172 72 aa6.31□□□□□ -1.4
ABR-233ENST00000575934 V9GYY9 64 aa6.3□□□□□ -1.4
ABR-233ENST00000575934 Q1T7F1 81 aa6.25□□□□□ -1.41
ABR-233ENST00000575934 MT1AP04731 61 aa6.18□□□□□ -1.42
ABR-233ENST00000575934 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
ABR-233ENST00000575934 KRTAP6-1Q3LI64 71 aa6.16□□□□□ -1.42
ABR-233ENST00000575934 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
ABR-233ENST00000575934 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
ABR-233ENST00000575934 A6NED7 52 aa6.07□□□□□ -1.44
ABR-233ENST00000575934 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
ABR-233ENST00000575934 ROMO1P60602 79 aa5.99□□□□□ -1.45
ABR-233ENST00000575934 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
ABR-233ENST00000575934 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
ABR-233ENST00000575934 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
ABR-233ENST00000575934 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
ABR-233ENST00000575934 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
ABR-233ENST00000575934 MT3P25713 68 aa5.65□□□□□ -1.5
ABR-233ENST00000575934 MUC5ACP98088 5654 aa5.65□□□□□ -1.51
ABR-233ENST00000575934 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
ABR-233ENST00000575934 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
ABR-233ENST00000575934 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
ABR-233ENST00000575934 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
ABR-233ENST00000575934 PCP4P48539 62 aa5.34□□□□□ -1.55
ABR-233ENST00000575934 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
ABR-233ENST00000575934 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
ABR-233ENST00000575934 BRK1Q8WUW1 75 aa4.93□□□□□ -1.62
ABR-233ENST00000575934 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
ABR-233ENST00000575934 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
ABR-233ENST00000575934 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
ABR-233ENST00000575934 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
ABR-233ENST00000575934 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
ABR-233ENST00000575934 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
ABR-233ENST00000575934 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
ABR-233ENST00000575934 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
ABR-233ENST00000575934 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
ABR-233ENST00000575934 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
ABR-233ENST00000575934 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
ABR-233ENST00000575934 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
ABR-233ENST00000575934 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
ABR-233ENST00000575934 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
ABR-233ENST00000575934 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
ABR-233ENST00000575934 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
ABR-233ENST00000575934 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
ABR-233ENST00000575934 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
ABR-233ENST00000575934 PRM1P04553 51 aa3.05□□□□□ -1.92
ABR-233ENST00000575934 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
ABR-233ENST00000575934 H3BS24 57 aa2.84□□□□□ -1.95
ABR-233ENST00000575934 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
ABR-233ENST00000575934 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
ABR-233ENST00000575934 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
ABR-233ENST00000575934 INE1O15225 51 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 86.2 ms