RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
ABR-227ENST00000574266 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
ABR-227ENST00000574266 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
ABR-227ENST00000574266 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
ABR-227ENST00000574266 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
ABR-227ENST00000574266 CCDC179H3BU77 68 aa5.9□□□□□ -1.46
ABR-227ENST00000574266 UQCR11O14957 56 aa5.9□□□□□ -1.46
ABR-227ENST00000574266 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
ABR-227ENST00000574266 K7ERS5 55 aa5.81□□□□□ -1.48
ABR-227ENST00000574266 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
ABR-227ENST00000574266 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
ABR-227ENST00000574266 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
ABR-227ENST00000574266 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
ABR-227ENST00000574266 TMEM258P61165 79 aa5.74□□□□□ -1.49
ABR-227ENST00000574266 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
ABR-227ENST00000574266 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
ABR-227ENST00000574266 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
ABR-227ENST00000574266 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
ABR-227ENST00000574266 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
ABR-227ENST00000574266 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
ABR-227ENST00000574266 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
ABR-227ENST00000574266 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
ABR-227ENST00000574266 V9GYY9 64 aa5.59□□□□□ -1.51
ABR-227ENST00000574266 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
ABR-227ENST00000574266 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
ABR-227ENST00000574266 PSPHP1O15172 72 aa5.49□□□□□ -1.53
ABR-227ENST00000574266 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
ABR-227ENST00000574266 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
ABR-227ENST00000574266 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
ABR-227ENST00000574266 Q1T7F1 81 aa5.41□□□□□ -1.54
ABR-227ENST00000574266 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
ABR-227ENST00000574266 A6NED7 52 aa5.36□□□□□ -1.55
ABR-227ENST00000574266 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
ABR-227ENST00000574266 MT1AP04731 61 aa5.24□□□□□ -1.57
ABR-227ENST00000574266 ROMO1P60602 79 aa5.24□□□□□ -1.57
ABR-227ENST00000574266 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
ABR-227ENST00000574266 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
ABR-227ENST00000574266 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
ABR-227ENST00000574266 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
ABR-227ENST00000574266 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
ABR-227ENST00000574266 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
ABR-227ENST00000574266 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
ABR-227ENST00000574266 PCP4P48539 62 aa4.91□□□□□ -1.62
ABR-227ENST00000574266 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
ABR-227ENST00000574266 MT3P25713 68 aa4.88□□□□□ -1.63
ABR-227ENST00000574266 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
ABR-227ENST00000574266 AHNAKQ09666 5890 aaKnown RBP4.78□□□□□ -1.64
ABR-227ENST00000574266 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
ABR-227ENST00000574266 MUC5ACP98088 5654 aa4.77□□□□□ -1.65
ABR-227ENST00000574266 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
ABR-227ENST00000574266 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
ABR-227ENST00000574266 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
ABR-227ENST00000574266 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
ABR-227ENST00000574266 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
ABR-227ENST00000574266 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
ABR-227ENST00000574266 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
ABR-227ENST00000574266 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
ABR-227ENST00000574266 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
ABR-227ENST00000574266 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
ABR-227ENST00000574266 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
ABR-227ENST00000574266 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
ABR-227ENST00000574266 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
ABR-227ENST00000574266 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
ABR-227ENST00000574266 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
ABR-227ENST00000574266 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
ABR-227ENST00000574266 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
ABR-227ENST00000574266 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
ABR-227ENST00000574266 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
ABR-227ENST00000574266 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
ABR-227ENST00000574266 H3BS24 57 aa3.37□□□□□ -1.87
ABR-227ENST00000574266 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
ABR-227ENST00000574266 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
ABR-227ENST00000574266 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
ABR-227ENST00000574266 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
ABR-227ENST00000574266 PRM1P04553 51 aa2.64□□□□□ -1.99
ABR-227ENST00000574266 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
ABR-227ENST00000574266 INE1O15225 51 aa2.36□□□□□ -2.03
ABR-227ENST00000574266 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 121.2 ms