RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 A8MU10 97 aa6.03□□□□□ -1.44
TVP23B-206ENST00000574226 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
TVP23B-206ENST00000574226 MT1GP13640 62 aa6□□□□□ -1.45
TVP23B-206ENST00000574226 PP632Q6XCG6 107 aa6□□□□□ -1.45
TVP23B-206ENST00000574226 TNP1P09430 55 aa5.99□□□□□ -1.45
TVP23B-206ENST00000574226 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
TVP23B-206ENST00000574226 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
TVP23B-206ENST00000574226 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
TVP23B-206ENST00000574226 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
TVP23B-206ENST00000574226 TMEM258P61165 79 aa5.91□□□□□ -1.46
TVP23B-206ENST00000574226 UQCR11O14957 56 aa5.87□□□□□ -1.47
TVP23B-206ENST00000574226 MT1LQ93083 61 aa5.87□□□□□ -1.47
TVP23B-206ENST00000574226 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
TVP23B-206ENST00000574226 MT1MQ8N339 61 aa5.85□□□□□ -1.47
TVP23B-206ENST00000574226 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
TVP23B-206ENST00000574226 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
TVP23B-206ENST00000574226 K7ERS5 55 aa5.68□□□□□ -1.5
TVP23B-206ENST00000574226 V9GYY9 64 aa5.67□□□□□ -1.5
TVP23B-206ENST00000574226 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
TVP23B-206ENST00000574226 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
TVP23B-206ENST00000574226 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
TVP23B-206ENST00000574226 MT4P47944 62 aa5.6□□□□□ -1.51
TVP23B-206ENST00000574226 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
TVP23B-206ENST00000574226 Q1T7F1 81 aa5.56□□□□□ -1.52
TVP23B-206ENST00000574226 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
TVP23B-206ENST00000574226 PSPHP1O15172 72 aa5.52□□□□□ -1.53
TVP23B-206ENST00000574226 A6NED7 52 aa5.38□□□□□ -1.55
TVP23B-206ENST00000574226 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
TVP23B-206ENST00000574226 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
TVP23B-206ENST00000574226 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
TVP23B-206ENST00000574226 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
TVP23B-206ENST00000574226 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
TVP23B-206ENST00000574226 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
TVP23B-206ENST00000574226 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
TVP23B-206ENST00000574226 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
TVP23B-206ENST00000574226 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
TVP23B-206ENST00000574226 ROMO1P60602 79 aa5.22□□□□□ -1.57
TVP23B-206ENST00000574226 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
TVP23B-206ENST00000574226 PCP4P48539 62 aa5.12□□□□□ -1.59
TVP23B-206ENST00000574226 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
TVP23B-206ENST00000574226 MT1AP04731 61 aa5.01□□□□□ -1.61
TVP23B-206ENST00000574226 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
TVP23B-206ENST00000574226 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
TVP23B-206ENST00000574226 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
TVP23B-206ENST00000574226 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
TVP23B-206ENST00000574226 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
TVP23B-206ENST00000574226 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
TVP23B-206ENST00000574226 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
TVP23B-206ENST00000574226 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
TVP23B-206ENST00000574226 MT3P25713 68 aa4.62□□□□□ -1.67
TVP23B-206ENST00000574226 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
TVP23B-206ENST00000574226 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
TVP23B-206ENST00000574226 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
TVP23B-206ENST00000574226 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
TVP23B-206ENST00000574226 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
TVP23B-206ENST00000574226 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
TVP23B-206ENST00000574226 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
TVP23B-206ENST00000574226 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
TVP23B-206ENST00000574226 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
TVP23B-206ENST00000574226 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
TVP23B-206ENST00000574226 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
TVP23B-206ENST00000574226 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
TVP23B-206ENST00000574226 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
TVP23B-206ENST00000574226 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
TVP23B-206ENST00000574226 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
TVP23B-206ENST00000574226 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
TVP23B-206ENST00000574226 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
TVP23B-206ENST00000574226 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TVP23B-206ENST00000574226 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
TVP23B-206ENST00000574226 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
TVP23B-206ENST00000574226 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
TVP23B-206ENST00000574226 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
TVP23B-206ENST00000574226 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
TVP23B-206ENST00000574226 PRM1P04553 51 aa2.62□□□□□ -1.99
TVP23B-206ENST00000574226 INE1O15225 51 aa2.46□□□□□ -2.02
TVP23B-206ENST00000574226 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
TVP23B-206ENST00000574226 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 75.6 ms