RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TMEM258P61165 79 aa9.03□□□□□ -0.96
NPLOC4-215ENST00000574095 GPR98Q8WXG9 6306 aa9.01□□□□□ -0.97
NPLOC4-215ENST00000574095 UQCR11O14957 56 aa9.01□□□□□ -0.97
NPLOC4-215ENST00000574095 LCE4AQ5TA78 99 aa9.01□□□□□ -0.97
NPLOC4-215ENST00000574095 MT4P47944 62 aa8.98□□□□□ -0.97
NPLOC4-215ENST00000574095 KRTAP12-3P60328 96 aa8.91□□□□□ -0.98
NPLOC4-215ENST00000574095 KRTAP4-7Q9BYR0 210 aa8.86□□□□□ -0.99
NPLOC4-215ENST00000574095 HMCN1Q96RW7 5635 aa8.85□□□□□ -0.99
NPLOC4-215ENST00000574095 KRTAP5-4Q6L8H1 288 aa8.84□□□□□ -0.99
NPLOC4-215ENST00000574095 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
NPLOC4-215ENST00000574095 KRTAP4-6Q9BYQ5 205 aa8.72□□□□□ -1.01
NPLOC4-215ENST00000574095 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.02
NPLOC4-215ENST00000574095 K7ERS5 55 aa8.63□□□□□ -1.03
NPLOC4-215ENST00000574095 PSPHP1O15172 72 aa8.61□□□□□ -1.03
NPLOC4-215ENST00000574095 V9GYY9 64 aa8.57□□□□□ -1.04
NPLOC4-215ENST00000574095 AHNAK2Q8IVF2 5795 aa8.55□□□□□ -1.04
NPLOC4-215ENST00000574095 Q1T7F1 81 aa8.52□□□□□ -1.05
NPLOC4-215ENST00000574095 KRTAP5-5Q701N2 237 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-215ENST00000574095 KRTAP5-10Q6L8G5 202 aa8.43□□□□□ -1.06
NPLOC4-215ENST00000574095 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
NPLOC4-215ENST00000574095 KRTAP20-2Q3LI61 65 aa8.36□□□□□ -1.07
NPLOC4-215ENST00000574095 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
NPLOC4-215ENST00000574095 KRTAP19-4Q3LI73 84 aa8.34□□□□□ -1.07
NPLOC4-215ENST00000574095 A6NED7 52 aa8.3□□□□□ -1.08
NPLOC4-215ENST00000574095 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
NPLOC4-215ENST00000574095 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
NPLOC4-215ENST00000574095 KRTAP12-4P60329 112 aa8.27□□□□□ -1.09
NPLOC4-215ENST00000574095 SYNE1Q8NF91 8797 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-215ENST00000574095 KRTAP5-3Q6L8H2 238 aa8.24□□□□□ -1.09
NPLOC4-215ENST00000574095 LCE3CQ5T5A8 94 aa8.2□□□□□ -1.1
NPLOC4-215ENST00000574095 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
NPLOC4-215ENST00000574095 KRTAP5-7Q6L8G8 165 aa8.09□□□□□ -1.11
NPLOC4-215ENST00000574095 ROMO1P60602 79 aa8.05□□□□□ -1.12
NPLOC4-215ENST00000574095 RPS28P62857 69 aaKnown RBP7.95□□□□□ -1.14
NPLOC4-215ENST00000574095 MT1AP04731 61 aa7.87□□□□□ -1.15
NPLOC4-215ENST00000574095 KRTAP6-1Q3LI64 71 aa7.86□□□□□ -1.15
NPLOC4-215ENST00000574095 KRTAP9-6A8MVA2 160 aa7.77□□□□□ -1.17
NPLOC4-215ENST00000574095 PCP4P48539 62 aa7.74□□□□□ -1.17
NPLOC4-215ENST00000574095 KRTAP5-2Q701N4 177 aa7.73□□□□□ -1.17
NPLOC4-215ENST00000574095 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
NPLOC4-215ENST00000574095 KRTAP4-11Q9BYQ6 195 aa7.64□□□□□ -1.19
NPLOC4-215ENST00000574095 KRTAP6-2Q3LI66 62 aa7.52□□□□□ -1.21
NPLOC4-215ENST00000574095 KRTAP5-8O75690 187 aa7.4□□□□□ -1.22
NPLOC4-215ENST00000574095 OBSCNQ5VST9 7968 aa7.3□□□□□ -1.24
NPLOC4-215ENST00000574095 MT3P25713 68 aa7.21□□□□□ -1.26
NPLOC4-215ENST00000574095 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
NPLOC4-215ENST00000574095 MUC5BQ9HC84 5762 aaPredicted RBP7.01□□□□□ -1.29
NPLOC4-215ENST00000574095 MUC5ACP98088 5654 aa6.99□□□□□ -1.29
NPLOC4-215ENST00000574095 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
NPLOC4-215ENST00000574095 AHNAKQ09666 5890 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-215ENST00000574095 KRTAP5-1Q6L8H4 278 aa6.95□□□□□ -1.3
NPLOC4-215ENST00000574095 LCE1EQ5T753 118 aa6.61□□□□□ -1.35
NPLOC4-215ENST00000574095 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
NPLOC4-215ENST00000574095 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
NPLOC4-215ENST00000574095 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
NPLOC4-215ENST00000574095 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
NPLOC4-215ENST00000574095 LCE1CQ5T751 118 aa6.14□□□□□ -1.43
NPLOC4-215ENST00000574095 LCE3DQ9BYE3 92 aa5.9□□□□□ -1.46
NPLOC4-215ENST00000574095 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
NPLOC4-215ENST00000574095 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
NPLOC4-215ENST00000574095 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
NPLOC4-215ENST00000574095 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.57□□□□□ -1.52
NPLOC4-215ENST00000574095 KRTAP5-11Q6L8G4 156 aa5.56□□□□□ -1.52
NPLOC4-215ENST00000574095 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
NPLOC4-215ENST00000574095 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
NPLOC4-215ENST00000574095 LCE1FQ5T754 118 aa5.42□□□□□ -1.54
NPLOC4-215ENST00000574095 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
NPLOC4-215ENST00000574095 KRTAP21-2Q3LI59 83 aa5.17□□□□□ -1.58
NPLOC4-215ENST00000574095 PHGR1C9JFL3 82 aa4.92□□□□□ -1.62
NPLOC4-215ENST00000574095 KRTAP4-4Q9BYR3 166 aa4.79□□□□□ -1.64
NPLOC4-215ENST00000574095 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
NPLOC4-215ENST00000574095 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
NPLOC4-215ENST00000574095 PRM1P04553 51 aa4.14□□□□□ -1.75
NPLOC4-215ENST00000574095 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
NPLOC4-215ENST00000574095 INE1O15225 51 aa3.23□□□□□ -1.89
NPLOC4-215ENST00000574095 MUC16Q8WXI7 14507 aa3.17□□□□□ -1.9
NPLOC4-215ENST00000574095 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
NPLOC4-215ENST00000574095 H3BS24 57 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 106 ms