RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
PRPF8-208ENST00000573716 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
PRPF8-208ENST00000573716 P0C880 135 aa4.77□□□□□ -1.65
PRPF8-208ENST00000573716 COA5Q86WW8 74 aa4.72□□□□□ -1.65
PRPF8-208ENST00000573716 H0Y9P7 68 aa4.71□□□□□ -1.66
PRPF8-208ENST00000573716 MT4P47944 62 aa4.66□□□□□ -1.66
PRPF8-208ENST00000573716 A8MU10 97 aa4.64□□□□□ -1.67
PRPF8-208ENST00000573716 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PRPF8-208ENST00000573716 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
PRPF8-208ENST00000573716 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
PRPF8-208ENST00000573716 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
PRPF8-208ENST00000573716 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
PRPF8-208ENST00000573716 ACYP2P14621 99 aa4.58□□□□□ -1.68
PRPF8-208ENST00000573716 UQCR11O14957 56 aa4.56□□□□□ -1.68
PRPF8-208ENST00000573716 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
PRPF8-208ENST00000573716 MT1EP04732 61 aa4.55□□□□□ -1.68
PRPF8-208ENST00000573716 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
PRPF8-208ENST00000573716 A0A1B0GU69 56 aa4.51□□□□□ -1.69
PRPF8-208ENST00000573716 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
PRPF8-208ENST00000573716 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
PRPF8-208ENST00000573716 ROMO1P60602 79 aa4.46□□□□□ -1.7
PRPF8-208ENST00000573716 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
PRPF8-208ENST00000573716 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
PRPF8-208ENST00000573716 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
PRPF8-208ENST00000573716 MT1GP13640 62 aa4.43□□□□□ -1.7
PRPF8-208ENST00000573716 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
PRPF8-208ENST00000573716 MT3P25713 68 aa4.42□□□□□ -1.7
PRPF8-208ENST00000573716 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
PRPF8-208ENST00000573716 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
PRPF8-208ENST00000573716 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PRPF8-208ENST00000573716 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
PRPF8-208ENST00000573716 MT1MQ8N339 61 aa4.37□□□□□ -1.71
PRPF8-208ENST00000573716 K7ERS5 55 aa4.33□□□□□ -1.72
PRPF8-208ENST00000573716 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
PRPF8-208ENST00000573716 A0A0D9SG42 100 aa4.32□□□□□ -1.72
PRPF8-208ENST00000573716 MT1LQ93083 61 aa4.28□□□□□ -1.72
PRPF8-208ENST00000573716 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
PRPF8-208ENST00000573716 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
PRPF8-208ENST00000573716 A0A1B0GU33 70 aa4.17□□□□□ -1.74
PRPF8-208ENST00000573716 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
PRPF8-208ENST00000573716 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
PRPF8-208ENST00000573716 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
PRPF8-208ENST00000573716 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
PRPF8-208ENST00000573716 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
PRPF8-208ENST00000573716 LUZP6Q538Z0 58 aa4□□□□□ -1.77
PRPF8-208ENST00000573716 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
PRPF8-208ENST00000573716 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
PRPF8-208ENST00000573716 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
PRPF8-208ENST00000573716 TNP1P09430 55 aa3.93□□□□□ -1.78
PRPF8-208ENST00000573716 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
PRPF8-208ENST00000573716 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
PRPF8-208ENST00000573716 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
PRPF8-208ENST00000573716 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
PRPF8-208ENST00000573716 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
PRPF8-208ENST00000573716 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
PRPF8-208ENST00000573716 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
PRPF8-208ENST00000573716 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
PRPF8-208ENST00000573716 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
PRPF8-208ENST00000573716 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
PRPF8-208ENST00000573716 MT1AP04731 61 aa3.63□□□□□ -1.83
PRPF8-208ENST00000573716 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PRPF8-208ENST00000573716 INE1O15225 51 aa3.59□□□□□ -1.83
PRPF8-208ENST00000573716 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PRPF8-208ENST00000573716 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
PRPF8-208ENST00000573716 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
PRPF8-208ENST00000573716 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
PRPF8-208ENST00000573716 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
PRPF8-208ENST00000573716 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
PRPF8-208ENST00000573716 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
PRPF8-208ENST00000573716 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
PRPF8-208ENST00000573716 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
PRPF8-208ENST00000573716 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
PRPF8-208ENST00000573716 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
PRPF8-208ENST00000573716 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
PRPF8-208ENST00000573716 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
PRPF8-208ENST00000573716 PRM1P04553 51 aa2.12□□□□□ -2.07
PRPF8-208ENST00000573716 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
PRPF8-208ENST00000573716 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 89.1 ms