RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 MT1MQ8N339 61 aa5.75□□□□□ -1.49
HCFC1R1-203ENST00000572355 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
HCFC1R1-203ENST00000572355 UQCR11O14957 56 aa5.69□□□□□ -1.5
HCFC1R1-203ENST00000572355 KRTAP5-4Q6L8H1 288 aa5.68□□□□□ -1.5
HCFC1R1-203ENST00000572355 MT1LQ93083 61 aa5.68□□□□□ -1.5
HCFC1R1-203ENST00000572355 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
HCFC1R1-203ENST00000572355 PSPHP1O15172 72 aa5.67□□□□□ -1.5
HCFC1R1-203ENST00000572355 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
HCFC1R1-203ENST00000572355 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
HCFC1R1-203ENST00000572355 TNP1P09430 55 aa5.6□□□□□ -1.51
HCFC1R1-203ENST00000572355 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
HCFC1R1-203ENST00000572355 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
HCFC1R1-203ENST00000572355 Q1T7F1 81 aa5.57□□□□□ -1.52
HCFC1R1-203ENST00000572355 PCP4P48539 62 aa5.56□□□□□ -1.52
HCFC1R1-203ENST00000572355 V9GYY9 64 aa5.56□□□□□ -1.52
HCFC1R1-203ENST00000572355 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
HCFC1R1-203ENST00000572355 A6NED7 52 aa5.44□□□□□ -1.54
HCFC1R1-203ENST00000572355 K7ERS5 55 aa5.43□□□□□ -1.54
HCFC1R1-203ENST00000572355 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
HCFC1R1-203ENST00000572355 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
HCFC1R1-203ENST00000572355 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
HCFC1R1-203ENST00000572355 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
HCFC1R1-203ENST00000572355 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
HCFC1R1-203ENST00000572355 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
HCFC1R1-203ENST00000572355 KRTAP5-5Q701N2 237 aaPredicted RBP5.29□□□□□ -1.56
HCFC1R1-203ENST00000572355 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
HCFC1R1-203ENST00000572355 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
HCFC1R1-203ENST00000572355 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
HCFC1R1-203ENST00000572355 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
HCFC1R1-203ENST00000572355 ROMO1P60602 79 aa5.14□□□□□ -1.59
HCFC1R1-203ENST00000572355 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
HCFC1R1-203ENST00000572355 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
HCFC1R1-203ENST00000572355 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
HCFC1R1-203ENST00000572355 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
HCFC1R1-203ENST00000572355 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
HCFC1R1-203ENST00000572355 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
HCFC1R1-203ENST00000572355 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
HCFC1R1-203ENST00000572355 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
HCFC1R1-203ENST00000572355 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
HCFC1R1-203ENST00000572355 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
HCFC1R1-203ENST00000572355 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
HCFC1R1-203ENST00000572355 MT1AP04731 61 aa4.82□□□□□ -1.64
HCFC1R1-203ENST00000572355 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
HCFC1R1-203ENST00000572355 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
HCFC1R1-203ENST00000572355 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
HCFC1R1-203ENST00000572355 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
HCFC1R1-203ENST00000572355 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
HCFC1R1-203ENST00000572355 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
HCFC1R1-203ENST00000572355 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
HCFC1R1-203ENST00000572355 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
HCFC1R1-203ENST00000572355 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
HCFC1R1-203ENST00000572355 MT3P25713 68 aa4.41□□□□□ -1.7
HCFC1R1-203ENST00000572355 H3BS24 57 aa4.39□□□□□ -1.71
HCFC1R1-203ENST00000572355 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
HCFC1R1-203ENST00000572355 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
HCFC1R1-203ENST00000572355 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
HCFC1R1-203ENST00000572355 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
HCFC1R1-203ENST00000572355 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
HCFC1R1-203ENST00000572355 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
HCFC1R1-203ENST00000572355 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
HCFC1R1-203ENST00000572355 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
HCFC1R1-203ENST00000572355 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
HCFC1R1-203ENST00000572355 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
HCFC1R1-203ENST00000572355 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
HCFC1R1-203ENST00000572355 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
HCFC1R1-203ENST00000572355 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
HCFC1R1-203ENST00000572355 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
HCFC1R1-203ENST00000572355 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
HCFC1R1-203ENST00000572355 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
HCFC1R1-203ENST00000572355 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
HCFC1R1-203ENST00000572355 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
HCFC1R1-203ENST00000572355 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
HCFC1R1-203ENST00000572355 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
HCFC1R1-203ENST00000572355 PRM1P04553 51 aa2.68□□□□□ -1.98
HCFC1R1-203ENST00000572355 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
HCFC1R1-203ENST00000572355 INE1O15225 51 aa2.38□□□□□ -2.03
HCFC1R1-203ENST00000572355 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 14 ms