RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
LITAF-211ENST00000572255 CCDC179H3BU77 68 aa5.93□□□□□ -1.46
LITAF-211ENST00000572255 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
LITAF-211ENST00000572255 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
LITAF-211ENST00000572255 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
LITAF-211ENST00000572255 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
LITAF-211ENST00000572255 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
LITAF-211ENST00000572255 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
LITAF-211ENST00000572255 UQCR11O14957 56 aa5.78□□□□□ -1.48
LITAF-211ENST00000572255 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
LITAF-211ENST00000572255 TMEM258P61165 79 aa5.69□□□□□ -1.5
LITAF-211ENST00000572255 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
LITAF-211ENST00000572255 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
LITAF-211ENST00000572255 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
LITAF-211ENST00000572255 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
LITAF-211ENST00000572255 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
LITAF-211ENST00000572255 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
LITAF-211ENST00000572255 K7ERS5 55 aa5.56□□□□□ -1.52
LITAF-211ENST00000572255 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
LITAF-211ENST00000572255 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
LITAF-211ENST00000572255 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
LITAF-211ENST00000572255 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
LITAF-211ENST00000572255 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
LITAF-211ENST00000572255 PSPHP1O15172 72 aa5.44□□□□□ -1.54
LITAF-211ENST00000572255 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
LITAF-211ENST00000572255 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
LITAF-211ENST00000572255 V9GYY9 64 aa5.42□□□□□ -1.54
LITAF-211ENST00000572255 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
LITAF-211ENST00000572255 Q1T7F1 81 aa5.37□□□□□ -1.55
LITAF-211ENST00000572255 A6NED7 52 aa5.25□□□□□ -1.57
LITAF-211ENST00000572255 MT1AP04731 61 aa5.24□□□□□ -1.57
LITAF-211ENST00000572255 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
LITAF-211ENST00000572255 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
LITAF-211ENST00000572255 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
LITAF-211ENST00000572255 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
LITAF-211ENST00000572255 ROMO1P60602 79 aa5.15□□□□□ -1.59
LITAF-211ENST00000572255 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
LITAF-211ENST00000572255 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
LITAF-211ENST00000572255 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
LITAF-211ENST00000572255 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
LITAF-211ENST00000572255 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
LITAF-211ENST00000572255 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
LITAF-211ENST00000572255 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
LITAF-211ENST00000572255 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
LITAF-211ENST00000572255 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
LITAF-211ENST00000572255 MT3P25713 68 aa4.79□□□□□ -1.64
LITAF-211ENST00000572255 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
LITAF-211ENST00000572255 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
LITAF-211ENST00000572255 PCP4P48539 62 aa4.66□□□□□ -1.66
LITAF-211ENST00000572255 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
LITAF-211ENST00000572255 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
LITAF-211ENST00000572255 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
LITAF-211ENST00000572255 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
LITAF-211ENST00000572255 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
LITAF-211ENST00000572255 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
LITAF-211ENST00000572255 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
LITAF-211ENST00000572255 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
LITAF-211ENST00000572255 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
LITAF-211ENST00000572255 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
LITAF-211ENST00000572255 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
LITAF-211ENST00000572255 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
LITAF-211ENST00000572255 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
LITAF-211ENST00000572255 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
LITAF-211ENST00000572255 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
LITAF-211ENST00000572255 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
LITAF-211ENST00000572255 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
LITAF-211ENST00000572255 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
LITAF-211ENST00000572255 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
LITAF-211ENST00000572255 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
LITAF-211ENST00000572255 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
LITAF-211ENST00000572255 PRM1P04553 51 aa2.62□□□□□ -1.99
LITAF-211ENST00000572255 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
LITAF-211ENST00000572255 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
LITAF-211ENST00000572255 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
LITAF-211ENST00000572255 INE1O15225 51 aa1.9□□□□□ -2.11
LITAF-211ENST00000572255 A0A0A0MQY5 61 aa1.76□□□□□ -2.13
LITAF-211ENST00000572255 H3BS24 57 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms