RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
TSR1-202ENST00000571806 TNP1P09430 55 aa5.37□□□□□ -1.55
TSR1-202ENST00000571806 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
TSR1-202ENST00000571806 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
TSR1-202ENST00000571806 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
TSR1-202ENST00000571806 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
TSR1-202ENST00000571806 V9GYY9 64 aa5.34□□□□□ -1.55
TSR1-202ENST00000571806 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
TSR1-202ENST00000571806 A0A1B0GU69 56 aa5.3□□□□□ -1.56
TSR1-202ENST00000571806 Q1T7F1 81 aa5.26□□□□□ -1.57
TSR1-202ENST00000571806 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
TSR1-202ENST00000571806 A8MU10 97 aa5.24□□□□□ -1.57
TSR1-202ENST00000571806 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
TSR1-202ENST00000571806 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
TSR1-202ENST00000571806 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
TSR1-202ENST00000571806 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
TSR1-202ENST00000571806 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
TSR1-202ENST00000571806 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
TSR1-202ENST00000571806 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
TSR1-202ENST00000571806 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
TSR1-202ENST00000571806 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
TSR1-202ENST00000571806 PSPHP1O15172 72 aa5.09□□□□□ -1.59
TSR1-202ENST00000571806 UQCR11O14957 56 aa5.03□□□□□ -1.6
TSR1-202ENST00000571806 A6NED7 52 aa5.01□□□□□ -1.61
TSR1-202ENST00000571806 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
TSR1-202ENST00000571806 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
TSR1-202ENST00000571806 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
TSR1-202ENST00000571806 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
TSR1-202ENST00000571806 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
TSR1-202ENST00000571806 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
TSR1-202ENST00000571806 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
TSR1-202ENST00000571806 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
TSR1-202ENST00000571806 K7ERS5 55 aa4.82□□□□□ -1.64
TSR1-202ENST00000571806 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
TSR1-202ENST00000571806 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
TSR1-202ENST00000571806 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
TSR1-202ENST00000571806 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
TSR1-202ENST00000571806 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
TSR1-202ENST00000571806 MT1AP04731 61 aa4.68□□□□□ -1.66
TSR1-202ENST00000571806 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
TSR1-202ENST00000571806 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
TSR1-202ENST00000571806 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
TSR1-202ENST00000571806 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
TSR1-202ENST00000571806 ROMO1P60602 79 aa4.53□□□□□ -1.68
TSR1-202ENST00000571806 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
TSR1-202ENST00000571806 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
TSR1-202ENST00000571806 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
TSR1-202ENST00000571806 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
TSR1-202ENST00000571806 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
TSR1-202ENST00000571806 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
TSR1-202ENST00000571806 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
TSR1-202ENST00000571806 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
TSR1-202ENST00000571806 MT3P25713 68 aa4.33□□□□□ -1.72
TSR1-202ENST00000571806 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
TSR1-202ENST00000571806 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
TSR1-202ENST00000571806 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
TSR1-202ENST00000571806 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
TSR1-202ENST00000571806 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
TSR1-202ENST00000571806 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
TSR1-202ENST00000571806 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
TSR1-202ENST00000571806 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
TSR1-202ENST00000571806 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
TSR1-202ENST00000571806 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
TSR1-202ENST00000571806 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
TSR1-202ENST00000571806 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
TSR1-202ENST00000571806 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
TSR1-202ENST00000571806 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
TSR1-202ENST00000571806 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
TSR1-202ENST00000571806 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
TSR1-202ENST00000571806 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
TSR1-202ENST00000571806 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
TSR1-202ENST00000571806 INE1O15225 51 aa2.94□□□□□ -1.94
TSR1-202ENST00000571806 H3BS24 57 aa2.91□□□□□ -1.94
TSR1-202ENST00000571806 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
TSR1-202ENST00000571806 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TSR1-202ENST00000571806 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
TSR1-202ENST00000571806 PRM1P04553 51 aa2.31□□□□□ -2.04
TSR1-202ENST00000571806 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 40 ms