RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
MAP1LC3B-208ENST00000570189 LCE4AQ5TA78 99 aa6□□□□□ -1.45
MAP1LC3B-208ENST00000570189 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
MAP1LC3B-208ENST00000570189 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
MAP1LC3B-208ENST00000570189 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
MAP1LC3B-208ENST00000570189 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
MAP1LC3B-208ENST00000570189 KRTAP5-4Q6L8H1 288 aa5.91□□□□□ -1.46
MAP1LC3B-208ENST00000570189 GPR98Q8WXG9 6306 aa5.91□□□□□ -1.46
MAP1LC3B-208ENST00000570189 HMCN1Q96RW7 5635 aa5.89□□□□□ -1.47
MAP1LC3B-208ENST00000570189 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
MAP1LC3B-208ENST00000570189 UQCR11O14957 56 aa5.83□□□□□ -1.48
MAP1LC3B-208ENST00000570189 MT4P47944 62 aa5.83□□□□□ -1.48
MAP1LC3B-208ENST00000570189 TMEM258P61165 79 aa5.83□□□□□ -1.48
MAP1LC3B-208ENST00000570189 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
MAP1LC3B-208ENST00000570189 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
MAP1LC3B-208ENST00000570189 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
MAP1LC3B-208ENST00000570189 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
MAP1LC3B-208ENST00000570189 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
MAP1LC3B-208ENST00000570189 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
MAP1LC3B-208ENST00000570189 KRTAP5-10Q6L8G5 202 aa5.64□□□□□ -1.51
MAP1LC3B-208ENST00000570189 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
MAP1LC3B-208ENST00000570189 K7ERS5 55 aa5.57□□□□□ -1.52
MAP1LC3B-208ENST00000570189 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
MAP1LC3B-208ENST00000570189 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
MAP1LC3B-208ENST00000570189 V9GYY9 64 aa5.55□□□□□ -1.52
MAP1LC3B-208ENST00000570189 KRTAP20-2Q3LI61 65 aa5.53□□□□□ -1.52
MAP1LC3B-208ENST00000570189 Q1T7F1 81 aa5.51□□□□□ -1.53
MAP1LC3B-208ENST00000570189 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
MAP1LC3B-208ENST00000570189 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
MAP1LC3B-208ENST00000570189 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
MAP1LC3B-208ENST00000570189 PSPHP1O15172 72 aa5.45□□□□□ -1.54
MAP1LC3B-208ENST00000570189 KRTAP5-7Q6L8G8 165 aa5.44□□□□□ -1.54
MAP1LC3B-208ENST00000570189 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
MAP1LC3B-208ENST00000570189 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
MAP1LC3B-208ENST00000570189 A6NED7 52 aa5.27□□□□□ -1.57
MAP1LC3B-208ENST00000570189 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
MAP1LC3B-208ENST00000570189 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
MAP1LC3B-208ENST00000570189 MT1AP04731 61 aa5.19□□□□□ -1.58
MAP1LC3B-208ENST00000570189 ROMO1P60602 79 aa5.18□□□□□ -1.58
MAP1LC3B-208ENST00000570189 KRTAP5-2Q701N4 177 aa5.17□□□□□ -1.58
MAP1LC3B-208ENST00000570189 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
MAP1LC3B-208ENST00000570189 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
MAP1LC3B-208ENST00000570189 H3BS24 57 aa5.08□□□□□ -1.6
MAP1LC3B-208ENST00000570189 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
MAP1LC3B-208ENST00000570189 PCP4P48539 62 aa5.03□□□□□ -1.6
MAP1LC3B-208ENST00000570189 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
MAP1LC3B-208ENST00000570189 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
MAP1LC3B-208ENST00000570189 MT3P25713 68 aa4.75□□□□□ -1.65
MAP1LC3B-208ENST00000570189 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
MAP1LC3B-208ENST00000570189 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
MAP1LC3B-208ENST00000570189 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
MAP1LC3B-208ENST00000570189 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
MAP1LC3B-208ENST00000570189 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
MAP1LC3B-208ENST00000570189 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
MAP1LC3B-208ENST00000570189 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
MAP1LC3B-208ENST00000570189 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
MAP1LC3B-208ENST00000570189 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
MAP1LC3B-208ENST00000570189 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
MAP1LC3B-208ENST00000570189 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
MAP1LC3B-208ENST00000570189 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
MAP1LC3B-208ENST00000570189 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
MAP1LC3B-208ENST00000570189 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
MAP1LC3B-208ENST00000570189 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
MAP1LC3B-208ENST00000570189 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
MAP1LC3B-208ENST00000570189 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
MAP1LC3B-208ENST00000570189 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
MAP1LC3B-208ENST00000570189 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
MAP1LC3B-208ENST00000570189 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
MAP1LC3B-208ENST00000570189 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
MAP1LC3B-208ENST00000570189 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
MAP1LC3B-208ENST00000570189 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
MAP1LC3B-208ENST00000570189 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
MAP1LC3B-208ENST00000570189 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
MAP1LC3B-208ENST00000570189 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
MAP1LC3B-208ENST00000570189 PRM1P04553 51 aa2.61□□□□□ -1.99
MAP1LC3B-208ENST00000570189 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
MAP1LC3B-208ENST00000570189 INE1O15225 51 aa2.27□□□□□ -2.05
MAP1LC3B-208ENST00000570189 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 118.9 ms