RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 SPRR2DP22532 72 aa3□□□□□ -1.93
CNOT1-218ENST00000569732 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
CNOT1-218ENST00000569732 PSPHP1O15172 72 aa2.98□□□□□ -1.93
CNOT1-218ENST00000569732 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
CNOT1-218ENST00000569732 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
CNOT1-218ENST00000569732 V9GYY9 64 aa2.98□□□□□ -1.93
CNOT1-218ENST00000569732 LINC01558Q9Y6Z2 57 aa2.96□□□□□ -1.94
CNOT1-218ENST00000569732 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
CNOT1-218ENST00000569732 MT1XP80297 61 aa2.95□□□□□ -1.94
CNOT1-218ENST00000569732 LINC01554Q52M75 96 aa2.95□□□□□ -1.94
CNOT1-218ENST00000569732 A0A1B0GU69 56 aa2.94□□□□□ -1.94
CNOT1-218ENST00000569732 A0A1B0GU33 70 aa2.93□□□□□ -1.94
CNOT1-218ENST00000569732 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
CNOT1-218ENST00000569732 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
CNOT1-218ENST00000569732 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
CNOT1-218ENST00000569732 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
CNOT1-218ENST00000569732 Q1T7F1 81 aa2.88□□□□□ -1.95
CNOT1-218ENST00000569732 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
CNOT1-218ENST00000569732 A0A0D9SG42 100 aa2.87□□□□□ -1.95
CNOT1-218ENST00000569732 RPS28P62857 69 aaKnown RBP2.87□□□□□ -1.95
CNOT1-218ENST00000569732 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
CNOT1-218ENST00000569732 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
CNOT1-218ENST00000569732 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
CNOT1-218ENST00000569732 UQCR11O14957 56 aa2.81□□□□□ -1.96
CNOT1-218ENST00000569732 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
CNOT1-218ENST00000569732 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
CNOT1-218ENST00000569732 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
CNOT1-218ENST00000569732 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
CNOT1-218ENST00000569732 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
CNOT1-218ENST00000569732 A6NED7 52 aa2.71□□□□□ -1.98
CNOT1-218ENST00000569732 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
CNOT1-218ENST00000569732 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
CNOT1-218ENST00000569732 K7ERS5 55 aa2.66□□□□□ -1.98
CNOT1-218ENST00000569732 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CNOT1-218ENST00000569732 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
CNOT1-218ENST00000569732 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
CNOT1-218ENST00000569732 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
CNOT1-218ENST00000569732 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
CNOT1-218ENST00000569732 KRTAP19-7Q3SYF9 63 aa2.64□□□□□ -1.99
CNOT1-218ENST00000569732 TNP1P09430 55 aa2.63□□□□□ -1.99
CNOT1-218ENST00000569732 MT4P47944 62 aa2.62□□□□□ -1.99
CNOT1-218ENST00000569732 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
CNOT1-218ENST00000569732 MT1EP04732 61 aa2.6□□□□□ -1.99
CNOT1-218ENST00000569732 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
CNOT1-218ENST00000569732 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
CNOT1-218ENST00000569732 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
CNOT1-218ENST00000569732 MT1GP13640 62 aa2.56□□□□□ -2
CNOT1-218ENST00000569732 PP632Q6XCG6 107 aa2.56□□□□□ -2
CNOT1-218ENST00000569732 ROMO1P60602 79 aa2.54□□□□□ -2
CNOT1-218ENST00000569732 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
CNOT1-218ENST00000569732 MT1LQ93083 61 aa2.51□□□□□ -2.01
CNOT1-218ENST00000569732 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CNOT1-218ENST00000569732 MT1MQ8N339 61 aa2.49□□□□□ -2.01
CNOT1-218ENST00000569732 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
CNOT1-218ENST00000569732 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
CNOT1-218ENST00000569732 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
CNOT1-218ENST00000569732 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
CNOT1-218ENST00000569732 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
CNOT1-218ENST00000569732 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
CNOT1-218ENST00000569732 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
CNOT1-218ENST00000569732 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
CNOT1-218ENST00000569732 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
CNOT1-218ENST00000569732 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CNOT1-218ENST00000569732 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
CNOT1-218ENST00000569732 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
CNOT1-218ENST00000569732 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
CNOT1-218ENST00000569732 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
CNOT1-218ENST00000569732 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CNOT1-218ENST00000569732 MT1AP04731 61 aa2.13□□□□□ -2.07
CNOT1-218ENST00000569732 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
CNOT1-218ENST00000569732 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CNOT1-218ENST00000569732 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
CNOT1-218ENST00000569732 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
CNOT1-218ENST00000569732 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
CNOT1-218ENST00000569732 INE1O15225 51 aa1.5□□□□□ -2.17
CNOT1-218ENST00000569732 PRM1P04553 51 aa1.31□□□□□ -2.2
CNOT1-218ENST00000569732 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
CNOT1-218ENST00000569732 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms