RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	CAMK2N1	Q7Z7J9	78 aa		6.17	□□□□□ -1.42
PKM-223	ENST00000569050		A8MU10	97 aa		6.16	□□□□□ -1.42
PKM-223	ENST00000569050	MT1G	P13640	62 aa		6.15	□□□□□ -1.42
PKM-223	ENST00000569050	SMIM26	A0A096LP01	95 aa		6.12	□□□□□ -1.43
PKM-223	ENST00000569050	KRTAP12-1	P59990	96 aa		6.11	□□□□□ -1.43
PKM-223	ENST00000569050	PP632	Q6XCG6	107 aa		6.08	□□□□□ -1.44
PKM-223	ENST00000569050	MT1M	Q8N339	61 aa		6.08	□□□□□ -1.44
PKM-223	ENST00000569050	PSPHP1	O15172	72 aa		6.05	□□□□□ -1.44
PKM-223	ENST00000569050		V9GYY9	64 aa		6.03	□□□□□ -1.44
PKM-223	ENST00000569050	UQCR11	O14957	56 aa		6.02	□□□□□ -1.45
PKM-223	ENST00000569050		Q1T7F1	81 aa		6	□□□□□ -1.45
PKM-223	ENST00000569050	KRTAP19-5	Q3LI72	72 aa		6	□□□□□ -1.45
PKM-223	ENST00000569050	KRTAP4-3	Q9BYR4	195 aa		6	□□□□□ -1.45
PKM-223	ENST00000569050	MIR22HG	Q0VDD5	57 aa		5.95	□□□□□ -1.46
PKM-223	ENST00000569050	MT1L	Q93083	61 aa		5.93	□□□□□ -1.46
PKM-223	ENST00000569050	KRTAP20-2	Q3LI61	65 aa		5.92	□□□□□ -1.46
PKM-223	ENST00000569050	RPS28	P62857	69 aa	Known RBP	5.91	□□□□□ -1.46
PKM-223	ENST00000569050		A6NED7	52 aa		5.85	□□□□□ -1.47
PKM-223	ENST00000569050	C10orf95	Q9H7T3	257 aa		5.81	□□□□□ -1.48
PKM-223	ENST00000569050		K7ERS5	55 aa		5.76	□□□□□ -1.49
PKM-223	ENST00000569050	TNP1	P09430	55 aa		5.73	□□□□□ -1.49
PKM-223	ENST00000569050	AHNAK	Q09666	5890 aa	Known RBP	5.72	□□□□□ -1.49
PKM-223	ENST00000569050	SYNE1	Q8NF91	8797 aa	Known RBP	5.68	□□□□□ -1.5
PKM-223	ENST00000569050	LCE3A	Q5TA76	89 aa		5.65	□□□□□ -1.5
PKM-223	ENST00000569050	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.65	□□□□□ -1.5
PKM-223	ENST00000569050	KRTAP12-4	P60329	112 aa		5.63	□□□□□ -1.51
PKM-223	ENST00000569050	KRTAP4-7	Q9BYR0	210 aa		5.63	□□□□□ -1.51
PKM-223	ENST00000569050	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.63	□□□□□ -1.51
PKM-223	ENST00000569050	MUC5AC	P98088	5654 aa		5.62	□□□□□ -1.51
PKM-223	ENST00000569050	CDC42SE1	Q9NRR8	79 aa		5.6	□□□□□ -1.51
PKM-223	ENST00000569050	KRTAP4-11	Q9BYQ6	195 aa		5.57	□□□□□ -1.52
PKM-223	ENST00000569050	KRTAP25-1	Q3LHN0	102 aa		5.53	□□□□□ -1.52
PKM-223	ENST00000569050	KRTAP5-8	O75690	187 aa		5.45	□□□□□ -1.54
PKM-223	ENST00000569050	ROMO1	P60602	79 aa		5.44	□□□□□ -1.54
PKM-223	ENST00000569050	KRTAP12-3	P60328	96 aa		5.39	□□□□□ -1.55
PKM-223	ENST00000569050	BRK1	Q8WUW1	75 aa		5.38	□□□□□ -1.55
PKM-223	ENST00000569050	LOC100996750	A0A140TA64	210 aa		5.37	□□□□□ -1.55
PKM-223	ENST00000569050	KRTAP5-2	Q701N4	177 aa		5.33	□□□□□ -1.56
PKM-223	ENST00000569050	KRTAP23-1	A1A580	65 aa		5.26	□□□□□ -1.57
PKM-223	ENST00000569050	KRTAP9-9	Q9BYP9	154 aa		5.23	□□□□□ -1.57
PKM-223	ENST00000569050	OBSCN	Q5VST9	7968 aa		5.15	□□□□□ -1.58
PKM-223	ENST00000569050	KRTAP15-1	Q3LI76	137 aa		5.12	□□□□□ -1.59
PKM-223	ENST00000569050	KRTAP6-1	Q3LI64	71 aa		5.06	□□□□□ -1.6
PKM-223	ENST00000569050	PMAIP1	Q13794	54 aa		5.03	□□□□□ -1.6
PKM-223	ENST00000569050	MT1A	P04731	61 aa		5.02	□□□□□ -1.61
PKM-223	ENST00000569050	KRTAP6-2	Q3LI66	62 aa		4.97	□□□□□ -1.61
PKM-223	ENST00000569050	LCE3C	Q5T5A8	94 aa		4.97	□□□□□ -1.61
PKM-223	ENST00000569050	KRTAP19-4	Q3LI73	84 aa		4.94	□□□□□ -1.62
PKM-223	ENST00000569050	KRTAP5-1	Q6L8H4	278 aa		4.91	□□□□□ -1.62
PKM-223	ENST00000569050	KRTAP9-4	Q9BYQ2	154 aa		4.91	□□□□□ -1.62
PKM-223	ENST00000569050	PRO0628	Q9UI54	55 aa		4.88	□□□□□ -1.63
PKM-223	ENST00000569050	PRAC1	Q96KF2	57 aa		4.86	□□□□□ -1.63
PKM-223	ENST00000569050	KRTAP9-6	A8MVA2	160 aa		4.71	□□□□□ -1.66
PKM-223	ENST00000569050	KTN1-AS1	Q86SY8	53 aa		4.64	□□□□□ -1.67
PKM-223	ENST00000569050	MT3	P25713	68 aa		4.6	□□□□□ -1.67
PKM-223	ENST00000569050	SVIP	Q8NHG7	77 aa		4.5	□□□□□ -1.69
PKM-223	ENST00000569050	LCE1E	Q5T753	118 aa		4.39	□□□□□ -1.71
PKM-223	ENST00000569050	KRTAP4-2	Q9BYR5	136 aa		4.27	□□□□□ -1.73
PKM-223	ENST00000569050	LCE1B	Q5T7P3	118 aa		4.23	□□□□□ -1.73
PKM-223	ENST00000569050	KRTAP4-12	Q9BQ66	201 aa		4.14	□□□□□ -1.75
PKM-223	ENST00000569050	LCE1C	Q5T751	118 aa		4.09	□□□□□ -1.75
PKM-223	ENST00000569050	LUZP6	Q538Z0	58 aa		3.98	□□□□□ -1.77
PKM-223	ENST00000569050	KRTAP5-11	Q6L8G4	156 aa		3.93	□□□□□ -1.78
PKM-223	ENST00000569050	PHGR1	C9JFL3	82 aa		3.85	□□□□□ -1.79
PKM-223	ENST00000569050	LCE1F	Q5T754	118 aa		3.82	□□□□□ -1.8
PKM-223	ENST00000569050	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.64	□□□□□ -1.83
PKM-223	ENST00000569050	LCE3D	Q9BYE3	92 aa		3.64	□□□□□ -1.83
PKM-223	ENST00000569050	NDUFAF8	A1L188	74 aa		3.53	□□□□□ -1.84
PKM-223	ENST00000569050	LCE3E	Q5T5B0	92 aa		3.48	□□□□□ -1.85
PKM-223	ENST00000569050	KRTAP21-2	Q3LI59	83 aa		3.35	□□□□□ -1.87
PKM-223	ENST00000569050	MUC19	Q7Z5P9	8384 aa		3.26	□□□□□ -1.89
PKM-223	ENST00000569050	KRTAP4-4	Q9BYR3	166 aa		3.19	□□□□□ -1.9
PKM-223	ENST00000569050	KRTAP21-1	Q3LI58	79 aa		2.92	□□□□□ -1.94
PKM-223	ENST00000569050		A0A0A0MQY5	61 aa		2.9	□□□□□ -1.95
PKM-223	ENST00000569050	PRM1	P04553	51 aa		2.84	□□□□□ -1.95
PKM-223	ENST00000569050	INE1	O15225	51 aa		2.8	□□□□□ -1.96
PKM-223	ENST00000569050	MUC16	Q8WXI7	14507 aa		2.29	□□□□□ -2.04
PKM-223	ENST00000569050		H3BS24	57 aa		2.1	□□□□□ -2.07

Retrieved 78 of 20,778 RNA–protein pairs in 6.3 ms