RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
FANCA-232ENST00000568983 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
FANCA-232ENST00000568983 SERP2Q8N6R1 65 aa4□□□□□ -1.77
FANCA-232ENST00000568983 A8MU10 97 aa3.99□□□□□ -1.77
FANCA-232ENST00000568983 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
FANCA-232ENST00000568983 K7ERU9 68 aa3.98□□□□□ -1.77
FANCA-232ENST00000568983 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
FANCA-232ENST00000568983 A0A1B0GU69 56 aa3.96□□□□□ -1.78
FANCA-232ENST00000568983 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
FANCA-232ENST00000568983 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
FANCA-232ENST00000568983 H7BZZ5 65 aa3.79□□□□□ -1.8
FANCA-232ENST00000568983 COX7CP15954 63 aa3.78□□□□□ -1.8
FANCA-232ENST00000568983 PRR15LQ9BU68 103 aa3.77□□□□□ -1.81
FANCA-232ENST00000568983 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
FANCA-232ENST00000568983 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
FANCA-232ENST00000568983 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
FANCA-232ENST00000568983 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
FANCA-232ENST00000568983 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
FANCA-232ENST00000568983 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
FANCA-232ENST00000568983 MT1AP04731 61 aa3.62□□□□□ -1.83
FANCA-232ENST00000568983 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
FANCA-232ENST00000568983 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
FANCA-232ENST00000568983 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
FANCA-232ENST00000568983 UQCR11O14957 56 aa3.6□□□□□ -1.83
FANCA-232ENST00000568983 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
FANCA-232ENST00000568983 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
FANCA-232ENST00000568983 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
FANCA-232ENST00000568983 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
FANCA-232ENST00000568983 K7ERS5 55 aa3.55□□□□□ -1.84
FANCA-232ENST00000568983 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
FANCA-232ENST00000568983 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
FANCA-232ENST00000568983 ATP5EP56381 51 aaPredicted RBP3.52□□□□□ -1.85
FANCA-232ENST00000568983 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
FANCA-232ENST00000568983 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
FANCA-232ENST00000568983 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
FANCA-232ENST00000568983 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
FANCA-232ENST00000568983 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
FANCA-232ENST00000568983 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
FANCA-232ENST00000568983 KRTAP9-6A8MVA2 160 aa3.37□□□□□ -1.87
FANCA-232ENST00000568983 MT3P25713 68 aa3.34□□□□□ -1.87
FANCA-232ENST00000568983 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
FANCA-232ENST00000568983 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
FANCA-232ENST00000568983 TMEM258P61165 79 aa3.3□□□□□ -1.88
FANCA-232ENST00000568983 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
FANCA-232ENST00000568983 PSPHP1O15172 72 aa3.27□□□□□ -1.89
FANCA-232ENST00000568983 Q1T7F1 81 aa3.21□□□□□ -1.9
FANCA-232ENST00000568983 V9GYY9 64 aa3.2□□□□□ -1.9
FANCA-232ENST00000568983 ROMO1P60602 79 aa3.18□□□□□ -1.9
FANCA-232ENST00000568983 A6NED7 52 aa3.16□□□□□ -1.9
FANCA-232ENST00000568983 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
FANCA-232ENST00000568983 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
FANCA-232ENST00000568983 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
FANCA-232ENST00000568983 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
FANCA-232ENST00000568983 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
FANCA-232ENST00000568983 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
FANCA-232ENST00000568983 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
FANCA-232ENST00000568983 PHGR1C9JFL3 82 aa2.57□□□□□ -2
FANCA-232ENST00000568983 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
FANCA-232ENST00000568983 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
FANCA-232ENST00000568983 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
FANCA-232ENST00000568983 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
FANCA-232ENST00000568983 BRK1Q8WUW1 75 aa2.35□□□□□ -2.03
FANCA-232ENST00000568983 PCP4P48539 62 aa2.29□□□□□ -2.04
FANCA-232ENST00000568983 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
FANCA-232ENST00000568983 PMAIP1Q13794 54 aa2.17□□□□□ -2.06
FANCA-232ENST00000568983 PRAC1Q96KF2 57 aa2.17□□□□□ -2.06
FANCA-232ENST00000568983 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
FANCA-232ENST00000568983 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
FANCA-232ENST00000568983 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
FANCA-232ENST00000568983 SVIPQ8NHG7 77 aa1.78□□□□□ -2.12
FANCA-232ENST00000568983 KTN1-AS1Q86SY8 53 aa1.69□□□□□ -2.14
FANCA-232ENST00000568983 PRO0628Q9UI54 55 aa1.64□□□□□ -2.15
FANCA-232ENST00000568983 PRM1P04553 51 aa1.62□□□□□ -2.15
FANCA-232ENST00000568983 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
FANCA-232ENST00000568983 NDUFAF8A1L188 74 aa1.15□□□□□ -2.23
FANCA-232ENST00000568983 INE1O15225 51 aa0.82□□□□□ -2.28
FANCA-232ENST00000568983 A0A0A0MQY5 61 aa0.7□□□□□ -2.3
FANCA-232ENST00000568983 H3BS24 57 aa-0.21□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 77.5 ms