RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
SPSB3-210ENST00000568416 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
SPSB3-210ENST00000568416 CCDC179H3BU77 68 aa6.48□□□□□ -1.37
SPSB3-210ENST00000568416 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.38
SPSB3-210ENST00000568416 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
SPSB3-210ENST00000568416 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
SPSB3-210ENST00000568416 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SPSB3-210ENST00000568416 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
SPSB3-210ENST00000568416 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
SPSB3-210ENST00000568416 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
SPSB3-210ENST00000568416 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
SPSB3-210ENST00000568416 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
SPSB3-210ENST00000568416 UQCR11O14957 56 aa6.23□□□□□ -1.41
SPSB3-210ENST00000568416 TMEM258P61165 79 aa6.23□□□□□ -1.41
SPSB3-210ENST00000568416 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
SPSB3-210ENST00000568416 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
SPSB3-210ENST00000568416 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
SPSB3-210ENST00000568416 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
SPSB3-210ENST00000568416 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SPSB3-210ENST00000568416 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
SPSB3-210ENST00000568416 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
SPSB3-210ENST00000568416 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
SPSB3-210ENST00000568416 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
SPSB3-210ENST00000568416 K7ERS5 55 aa5.97□□□□□ -1.45
SPSB3-210ENST00000568416 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
SPSB3-210ENST00000568416 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
SPSB3-210ENST00000568416 V9GYY9 64 aa5.87□□□□□ -1.47
SPSB3-210ENST00000568416 PSPHP1O15172 72 aa5.86□□□□□ -1.47
SPSB3-210ENST00000568416 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
SPSB3-210ENST00000568416 Q1T7F1 81 aa5.79□□□□□ -1.48
SPSB3-210ENST00000568416 PCP4P48539 62 aa5.78□□□□□ -1.48
SPSB3-210ENST00000568416 MT1AP04731 61 aa5.72□□□□□ -1.49
SPSB3-210ENST00000568416 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
SPSB3-210ENST00000568416 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
SPSB3-210ENST00000568416 A6NED7 52 aa5.69□□□□□ -1.5
SPSB3-210ENST00000568416 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
SPSB3-210ENST00000568416 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
SPSB3-210ENST00000568416 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
SPSB3-210ENST00000568416 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
SPSB3-210ENST00000568416 MUC5ACP98088 5654 aa5.59□□□□□ -1.51
SPSB3-210ENST00000568416 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SPSB3-210ENST00000568416 ROMO1P60602 79 aa5.55□□□□□ -1.52
SPSB3-210ENST00000568416 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
SPSB3-210ENST00000568416 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
SPSB3-210ENST00000568416 MUC5BQ9HC84 5762 aaPredicted RBP5.5□□□□□ -1.53
SPSB3-210ENST00000568416 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
SPSB3-210ENST00000568416 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
SPSB3-210ENST00000568416 MT3P25713 68 aa5.24□□□□□ -1.57
SPSB3-210ENST00000568416 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
SPSB3-210ENST00000568416 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
SPSB3-210ENST00000568416 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
SPSB3-210ENST00000568416 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SPSB3-210ENST00000568416 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
SPSB3-210ENST00000568416 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
SPSB3-210ENST00000568416 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SPSB3-210ENST00000568416 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
SPSB3-210ENST00000568416 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
SPSB3-210ENST00000568416 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
SPSB3-210ENST00000568416 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
SPSB3-210ENST00000568416 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
SPSB3-210ENST00000568416 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
SPSB3-210ENST00000568416 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
SPSB3-210ENST00000568416 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SPSB3-210ENST00000568416 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
SPSB3-210ENST00000568416 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SPSB3-210ENST00000568416 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SPSB3-210ENST00000568416 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
SPSB3-210ENST00000568416 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
SPSB3-210ENST00000568416 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
SPSB3-210ENST00000568416 H3BS24 57 aa3.73□□□□□ -1.81
SPSB3-210ENST00000568416 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
SPSB3-210ENST00000568416 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SPSB3-210ENST00000568416 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
SPSB3-210ENST00000568416 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SPSB3-210ENST00000568416 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
SPSB3-210ENST00000568416 PRM1P04553 51 aa2.82□□□□□ -1.96
SPSB3-210ENST00000568416 INE1O15225 51 aa2.62□□□□□ -1.99
SPSB3-210ENST00000568416 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 97.5 ms