RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 MT1LQ93083 61 aa8.96□□□□□ -0.98
FANCA-228ENST00000567943 PP632Q6XCG6 107 aa8.94□□□□□ -0.98
FANCA-228ENST00000567943 MT1MQ8N339 61 aa8.93□□□□□ -0.98
FANCA-228ENST00000567943 K7ERS5 55 aa8.89□□□□□ -0.99
FANCA-228ENST00000567943 KRTAP4-9Q9BYQ8 210 aa8.88□□□□□ -0.99
FANCA-228ENST00000567943 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
FANCA-228ENST00000567943 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
FANCA-228ENST00000567943 KRTAP4-3Q9BYR4 195 aa8.76□□□□□ -1.01
FANCA-228ENST00000567943 A6NED7 52 aa8.74□□□□□ -1.01
FANCA-228ENST00000567943 PCP4P48539 62 aa8.71□□□□□ -1.02
FANCA-228ENST00000567943 LCE1DQ5T752 114 aa8.67□□□□□ -1.02
FANCA-228ENST00000567943 GPR98Q8WXG9 6306 aa8.67□□□□□ -1.02
FANCA-228ENST00000567943 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
FANCA-228ENST00000567943 LCE4AQ5TA78 99 aa8.61□□□□□ -1.03
FANCA-228ENST00000567943 HMCN1Q96RW7 5635 aa8.59□□□□□ -1.03
FANCA-228ENST00000567943 KRTAP4-7Q9BYR0 210 aa8.57□□□□□ -1.04
FANCA-228ENST00000567943 MT4P47944 62 aa8.55□□□□□ -1.04
FANCA-228ENST00000567943 KRTAP5-4Q6L8H1 288 aa8.53□□□□□ -1.04
FANCA-228ENST00000567943 CDC42SE1Q9NRR8 79 aa8.44□□□□□ -1.06
FANCA-228ENST00000567943 KRTAP23-1A1A580 65 aa8.43□□□□□ -1.06
FANCA-228ENST00000567943 KRTAP4-6Q9BYQ5 205 aa8.36□□□□□ -1.07
FANCA-228ENST00000567943 ROMO1P60602 79 aa8.32□□□□□ -1.08
FANCA-228ENST00000567943 AHNAK2Q8IVF2 5795 aa8.3□□□□□ -1.08
FANCA-228ENST00000567943 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
FANCA-228ENST00000567943 KRTAP19-4Q3LI73 84 aa8.23□□□□□ -1.09
FANCA-228ENST00000567943 KRTAP5-5Q701N2 237 aaPredicted RBP8.22□□□□□ -1.09
FANCA-228ENST00000567943 LOC100996750A0A140TA64 210 aa8.12□□□□□ -1.11
FANCA-228ENST00000567943 LCE3CQ5T5A8 94 aa8.09□□□□□ -1.11
FANCA-228ENST00000567943 KRTAP5-10Q6L8G5 202 aa8.06□□□□□ -1.12
FANCA-228ENST00000567943 KRTAP20-2Q3LI61 65 aa8.03□□□□□ -1.12
FANCA-228ENST00000567943 SYNE1Q8NF91 8797 aaKnown RBP8□□□□□ -1.13
FANCA-228ENST00000567943 SPRR5A0A1B0GTR4 108 aa7.96□□□□□ -1.14
FANCA-228ENST00000567943 KRTAP12-4P60329 112 aa7.89□□□□□ -1.15
FANCA-228ENST00000567943 KRTAP5-3Q6L8H2 238 aa7.87□□□□□ -1.15
FANCA-228ENST00000567943 KRTAP5-7Q6L8G8 165 aa7.72□□□□□ -1.17
FANCA-228ENST00000567943 BRK1Q8WUW1 75 aa7.67□□□□□ -1.18
FANCA-228ENST00000567943 KRTAP9-6A8MVA2 160 aa7.64□□□□□ -1.19
FANCA-228ENST00000567943 MT1AP04731 61 aa7.62□□□□□ -1.19
FANCA-228ENST00000567943 KRTAP6-1Q3LI64 71 aa7.6□□□□□ -1.19
FANCA-228ENST00000567943 KRTAP5-2Q701N4 177 aa7.49□□□□□ -1.21
FANCA-228ENST00000567943 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
FANCA-228ENST00000567943 KRTAP4-11Q9BYQ6 195 aa7.32□□□□□ -1.24
FANCA-228ENST00000567943 KRTAP6-2Q3LI66 62 aa7.24□□□□□ -1.25
FANCA-228ENST00000567943 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
FANCA-228ENST00000567943 KRTAP5-8O75690 187 aa7.11□□□□□ -1.27
FANCA-228ENST00000567943 OBSCNQ5VST9 7968 aa7.05□□□□□ -1.28
FANCA-228ENST00000567943 MT3P25713 68 aa6.96□□□□□ -1.3
FANCA-228ENST00000567943 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
FANCA-228ENST00000567943 MUC5BQ9HC84 5762 aaPredicted RBP6.8□□□□□ -1.32
FANCA-228ENST00000567943 AHNAKQ09666 5890 aaKnown RBP6.78□□□□□ -1.32
FANCA-228ENST00000567943 MUC5ACP98088 5654 aa6.76□□□□□ -1.33
FANCA-228ENST00000567943 PRO0628Q9UI54 55 aa6.74□□□□□ -1.33
FANCA-228ENST00000567943 KRTAP5-1Q6L8H4 278 aa6.71□□□□□ -1.34
FANCA-228ENST00000567943 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
FANCA-228ENST00000567943 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
FANCA-228ENST00000567943 LCE1EQ5T753 118 aa6.38□□□□□ -1.39
FANCA-228ENST00000567943 SVIPQ8NHG7 77 aa6.2□□□□□ -1.42
FANCA-228ENST00000567943 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
FANCA-228ENST00000567943 LCE1BQ5T7P3 118 aa6□□□□□ -1.45
FANCA-228ENST00000567943 LCE1CQ5T751 118 aa5.93□□□□□ -1.46
FANCA-228ENST00000567943 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
FANCA-228ENST00000567943 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
FANCA-228ENST00000567943 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
FANCA-228ENST00000567943 KRTAP4-12Q9BQ66 201 aa5.5□□□□□ -1.53
FANCA-228ENST00000567943 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.42□□□□□ -1.54
FANCA-228ENST00000567943 KRTAP5-11Q6L8G4 156 aa5.37□□□□□ -1.55
FANCA-228ENST00000567943 LCE1FQ5T754 118 aa5.19□□□□□ -1.58
FANCA-228ENST00000567943 KRTAP21-2Q3LI59 83 aa5.03□□□□□ -1.6
FANCA-228ENST00000567943 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
FANCA-228ENST00000567943 PHGR1C9JFL3 82 aa4.65□□□□□ -1.67
FANCA-228ENST00000567943 KRTAP4-4Q9BYR3 166 aa4.59□□□□□ -1.67
FANCA-228ENST00000567943 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
FANCA-228ENST00000567943 PRM1P04553 51 aa4.28□□□□□ -1.72
FANCA-228ENST00000567943 H3BS24 57 aa4.15□□□□□ -1.75
FANCA-228ENST00000567943 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
FANCA-228ENST00000567943 INE1O15225 51 aa3.98□□□□□ -1.77
FANCA-228ENST00000567943 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
FANCA-228ENST00000567943 MUC16Q8WXI7 14507 aa3.15□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 76.4 ms