RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 MT4P47944 62 aa5.93□□□□□ -1.46
EDC3-210ENST00000566219 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
EDC3-210ENST00000566219 MT1EP04732 61 aa5.89□□□□□ -1.47
EDC3-210ENST00000566219 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
EDC3-210ENST00000566219 A6NED7 52 aa5.86□□□□□ -1.47
EDC3-210ENST00000566219 LCE4AQ5TA78 99 aa5.86□□□□□ -1.47
EDC3-210ENST00000566219 KRTAP5-10Q6L8G5 202 aa5.86□□□□□ -1.47
EDC3-210ENST00000566219 K7ERS5 55 aa5.81□□□□□ -1.48
EDC3-210ENST00000566219 TNP1P09430 55 aa5.79□□□□□ -1.48
EDC3-210ENST00000566219 MT1GP13640 62 aa5.7□□□□□ -1.5
EDC3-210ENST00000566219 KRTAP5-7Q6L8G8 165 aa5.69□□□□□ -1.5
EDC3-210ENST00000566219 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
EDC3-210ENST00000566219 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
EDC3-210ENST00000566219 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
EDC3-210ENST00000566219 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
EDC3-210ENST00000566219 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.5
EDC3-210ENST00000566219 MT1MQ8N339 61 aa5.65□□□□□ -1.5
EDC3-210ENST00000566219 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
EDC3-210ENST00000566219 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
EDC3-210ENST00000566219 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
EDC3-210ENST00000566219 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
EDC3-210ENST00000566219 MT1LQ93083 61 aa5.54□□□□□ -1.52
EDC3-210ENST00000566219 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
EDC3-210ENST00000566219 ROMO1P60602 79 aa5.49□□□□□ -1.53
EDC3-210ENST00000566219 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
EDC3-210ENST00000566219 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
EDC3-210ENST00000566219 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
EDC3-210ENST00000566219 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
EDC3-210ENST00000566219 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
EDC3-210ENST00000566219 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
EDC3-210ENST00000566219 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
EDC3-210ENST00000566219 KRTAP15-1Q3LI76 137 aa5.2□□□□□ -1.58
EDC3-210ENST00000566219 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
EDC3-210ENST00000566219 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
EDC3-210ENST00000566219 AHNAKQ09666 5890 aaKnown RBP5.13□□□□□ -1.59
EDC3-210ENST00000566219 PMAIP1Q13794 54 aa5.07□□□□□ -1.6
EDC3-210ENST00000566219 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
EDC3-210ENST00000566219 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
EDC3-210ENST00000566219 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
EDC3-210ENST00000566219 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
EDC3-210ENST00000566219 PRO0628Q9UI54 55 aa4.99□□□□□ -1.61
EDC3-210ENST00000566219 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
EDC3-210ENST00000566219 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
EDC3-210ENST00000566219 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
EDC3-210ENST00000566219 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
EDC3-210ENST00000566219 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
EDC3-210ENST00000566219 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
EDC3-210ENST00000566219 KRTAP6-1Q3LI64 71 aa4.72□□□□□ -1.65
EDC3-210ENST00000566219 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
EDC3-210ENST00000566219 MT1AP04731 61 aa4.7□□□□□ -1.66
EDC3-210ENST00000566219 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
EDC3-210ENST00000566219 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
EDC3-210ENST00000566219 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
EDC3-210ENST00000566219 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
EDC3-210ENST00000566219 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
EDC3-210ENST00000566219 MT3P25713 68 aa4.3□□□□□ -1.72
EDC3-210ENST00000566219 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
EDC3-210ENST00000566219 LUZP6Q538Z0 58 aa4□□□□□ -1.77
EDC3-210ENST00000566219 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
EDC3-210ENST00000566219 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
EDC3-210ENST00000566219 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
EDC3-210ENST00000566219 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
EDC3-210ENST00000566219 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
EDC3-210ENST00000566219 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
EDC3-210ENST00000566219 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
EDC3-210ENST00000566219 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
EDC3-210ENST00000566219 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
EDC3-210ENST00000566219 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
EDC3-210ENST00000566219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
EDC3-210ENST00000566219 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
EDC3-210ENST00000566219 H3BS24 57 aa3.12□□□□□ -1.91
EDC3-210ENST00000566219 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
EDC3-210ENST00000566219 INE1O15225 51 aa3.04□□□□□ -1.92
EDC3-210ENST00000566219 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
EDC3-210ENST00000566219 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
EDC3-210ENST00000566219 PRM1P04553 51 aa2.82□□□□□ -1.96
EDC3-210ENST00000566219 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
EDC3-210ENST00000566219 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 102.8 ms