RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
ABCA3-204ENST00000566200 AHNAK2Q8IVF2 5795 aa6.66□□□□□ -1.34
ABCA3-204ENST00000566200 BRK1Q8WUW1 75 aa6.66□□□□□ -1.34
ABCA3-204ENST00000566200 KRTAP4-3Q9BYR4 195 aa6.62□□□□□ -1.35
ABCA3-204ENST00000566200 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
ABCA3-204ENST00000566200 SEC61GP60059 68 aa6.6□□□□□ -1.35
ABCA3-204ENST00000566200 A0A1B0GU33 70 aa6.59□□□□□ -1.35
ABCA3-204ENST00000566200 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
ABCA3-204ENST00000566200 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
ABCA3-204ENST00000566200 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
ABCA3-204ENST00000566200 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
ABCA3-204ENST00000566200 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
ABCA3-204ENST00000566200 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
ABCA3-204ENST00000566200 PSPHP1O15172 72 aa6.47□□□□□ -1.37
ABCA3-204ENST00000566200 A8MU10 97 aa6.42□□□□□ -1.38
ABCA3-204ENST00000566200 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
ABCA3-204ENST00000566200 PRR15LQ9BU68 103 aa6.41□□□□□ -1.38
ABCA3-204ENST00000566200 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
ABCA3-204ENST00000566200 TNP1P09430 55 aa6.37□□□□□ -1.39
ABCA3-204ENST00000566200 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
ABCA3-204ENST00000566200 A6NED7 52 aa6.33□□□□□ -1.4
ABCA3-204ENST00000566200 A0A1B0GU69 56 aa6.32□□□□□ -1.4
ABCA3-204ENST00000566200 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
ABCA3-204ENST00000566200 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
ABCA3-204ENST00000566200 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
ABCA3-204ENST00000566200 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
ABCA3-204ENST00000566200 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
ABCA3-204ENST00000566200 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
ABCA3-204ENST00000566200 UQCR11O14957 56 aa6.1□□□□□ -1.43
ABCA3-204ENST00000566200 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
ABCA3-204ENST00000566200 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
ABCA3-204ENST00000566200 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
ABCA3-204ENST00000566200 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
ABCA3-204ENST00000566200 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
ABCA3-204ENST00000566200 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
ABCA3-204ENST00000566200 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
ABCA3-204ENST00000566200 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
ABCA3-204ENST00000566200 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
ABCA3-204ENST00000566200 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
ABCA3-204ENST00000566200 K7ERS5 55 aa5.71□□□□□ -1.5
ABCA3-204ENST00000566200 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
ABCA3-204ENST00000566200 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
ABCA3-204ENST00000566200 MT1AP04731 61 aa5.67□□□□□ -1.5
ABCA3-204ENST00000566200 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
ABCA3-204ENST00000566200 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
ABCA3-204ENST00000566200 ROMO1P60602 79 aa5.54□□□□□ -1.52
ABCA3-204ENST00000566200 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
ABCA3-204ENST00000566200 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
ABCA3-204ENST00000566200 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
ABCA3-204ENST00000566200 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
ABCA3-204ENST00000566200 MUC5BQ9HC84 5762 aaPredicted RBP5.48□□□□□ -1.53
ABCA3-204ENST00000566200 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
ABCA3-204ENST00000566200 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
ABCA3-204ENST00000566200 H3BS24 57 aa5.32□□□□□ -1.56
ABCA3-204ENST00000566200 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
ABCA3-204ENST00000566200 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
ABCA3-204ENST00000566200 MT3P25713 68 aa5.17□□□□□ -1.58
ABCA3-204ENST00000566200 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
ABCA3-204ENST00000566200 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
ABCA3-204ENST00000566200 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
ABCA3-204ENST00000566200 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
ABCA3-204ENST00000566200 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
ABCA3-204ENST00000566200 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
ABCA3-204ENST00000566200 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
ABCA3-204ENST00000566200 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
ABCA3-204ENST00000566200 INE1O15225 51 aa4.3□□□□□ -1.72
ABCA3-204ENST00000566200 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
ABCA3-204ENST00000566200 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
ABCA3-204ENST00000566200 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
ABCA3-204ENST00000566200 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
ABCA3-204ENST00000566200 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
ABCA3-204ENST00000566200 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
ABCA3-204ENST00000566200 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
ABCA3-204ENST00000566200 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
ABCA3-204ENST00000566200 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
ABCA3-204ENST00000566200 PRM1P04553 51 aa2.86□□□□□ -1.95
ABCA3-204ENST00000566200 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
ABCA3-204ENST00000566200 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 383.9 ms