RNA–Protein interactions for RNA: ENST00000564968.1

CLCN7-208, Transcript of chloride voltage-gated channel 7, human

TSL 4

Gene CLCN7, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN7-208	ENST00000564968	KRTAP19-3	Q7Z4W3	81 aa		5.98	□□□□□ -1.45
CLCN7-208	ENST00000564968	KRTAP19-7	Q3SYF9	63 aa		5.97	□□□□□ -1.45
CLCN7-208	ENST00000564968	MT1E	P04732	61 aa		5.95	□□□□□ -1.46
CLCN7-208	ENST00000564968		K7ERS5	55 aa		5.93	□□□□□ -1.46
CLCN7-208	ENST00000564968	HMCN1	Q96RW7	5635 aa		5.92	□□□□□ -1.46
CLCN7-208	ENST00000564968	MT4	P47944	62 aa		5.91	□□□□□ -1.46
CLCN7-208	ENST00000564968	CAMK2N1	Q7Z7J9	78 aa		5.91	□□□□□ -1.46
CLCN7-208	ENST00000564968	KRTAP25-1	Q3LHN0	102 aa		5.89	□□□□□ -1.47
CLCN7-208	ENST00000564968	AHNAK2	Q8IVF2	5795 aa		5.85	□□□□□ -1.47
CLCN7-208	ENST00000564968	KRTAP13-4	Q3LI77	160 aa		5.82	□□□□□ -1.48
CLCN7-208	ENST00000564968	LCE4A	Q5TA78	99 aa		5.81	□□□□□ -1.48
CLCN7-208	ENST00000564968	ROMO1	P60602	79 aa		5.77	□□□□□ -1.49
CLCN7-208	ENST00000564968	MT1G	P13640	62 aa		5.75	□□□□□ -1.49
CLCN7-208	ENST00000564968	KRTAP19-5	Q3LI72	72 aa		5.75	□□□□□ -1.49
CLCN7-208	ENST00000564968	PP632	Q6XCG6	107 aa		5.74	□□□□□ -1.49
CLCN7-208	ENST00000564968		A0A0D9SG42	100 aa		5.73	□□□□□ -1.49
CLCN7-208	ENST00000564968	KRTAP5-10	Q6L8G5	202 aa		5.73	□□□□□ -1.49
CLCN7-208	ENST00000564968	MT1M	Q8N339	61 aa		5.71	□□□□□ -1.5
CLCN7-208	ENST00000564968	KRTAP4-6	Q9BYQ5	205 aa		5.65	□□□□□ -1.5
CLCN7-208	ENST00000564968	KRTAP4-3	Q9BYR4	195 aa		5.63	□□□□□ -1.51
CLCN7-208	ENST00000564968	MT1L	Q93083	61 aa		5.62	□□□□□ -1.51
CLCN7-208	ENST00000564968	KRTAP5-4	Q6L8H1	288 aa		5.61	□□□□□ -1.51
CLCN7-208	ENST00000564968	SPINT4	Q6UDR6	99 aa		5.57	□□□□□ -1.52
CLCN7-208	ENST00000564968		H3BS24	57 aa		5.54	□□□□□ -1.52
CLCN7-208	ENST00000564968	KRTAP12-1	P59990	96 aa		5.53	□□□□□ -1.52
CLCN7-208	ENST00000564968	KRTAP5-7	Q6L8G8	165 aa		5.53	□□□□□ -1.52
CLCN7-208	ENST00000564968	KRTAP5-3	Q6L8H2	238 aa		5.51	□□□□□ -1.53
CLCN7-208	ENST00000564968	C10orf95	Q9H7T3	257 aa		5.47	□□□□□ -1.53
CLCN7-208	ENST00000564968	LCE3A	Q5TA76	89 aa		5.44	□□□□□ -1.54
CLCN7-208	ENST00000564968	SPRR5	A0A1B0GTR4	108 aa		5.42	□□□□□ -1.54
CLCN7-208	ENST00000564968	KRTAP15-1	Q3LI76	137 aa		5.39	□□□□□ -1.55
CLCN7-208	ENST00000564968	KRTAP20-2	Q3LI61	65 aa		5.38	□□□□□ -1.55
CLCN7-208	ENST00000564968	KRTAP4-7	Q9BYR0	210 aa		5.38	□□□□□ -1.55
CLCN7-208	ENST00000564968	TNP1	P09430	55 aa		5.29	□□□□□ -1.56
CLCN7-208	ENST00000564968	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.23	□□□□□ -1.57
CLCN7-208	ENST00000564968	KRTAP12-4	P60329	112 aa		5.21	□□□□□ -1.58
CLCN7-208	ENST00000564968	KRTAP12-3	P60328	96 aa		5.19	□□□□□ -1.58
CLCN7-208	ENST00000564968	NDUFAF8	A1L188	74 aa		5.17	□□□□□ -1.58
CLCN7-208	ENST00000564968	LOC100996750	A0A140TA64	210 aa		5.12	□□□□□ -1.59
CLCN7-208	ENST00000564968	SYNE1	Q8NF91	8797 aa	Known RBP	5.09	□□□□□ -1.59
CLCN7-208	ENST00000564968	KRTAP23-1	A1A580	65 aa		5.08	□□□□□ -1.6
CLCN7-208	ENST00000564968	KRTAP4-11	Q9BYQ6	195 aa		4.99	□□□□□ -1.61
CLCN7-208	ENST00000564968	LUZP6	Q538Z0	58 aa		4.91	□□□□□ -1.62
CLCN7-208	ENST00000564968	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.87	□□□□□ -1.63
CLCN7-208	ENST00000564968	AHNAK	Q09666	5890 aa	Known RBP	4.87	□□□□□ -1.63
CLCN7-208	ENST00000564968	MUC5AC	P98088	5654 aa		4.87	□□□□□ -1.63
CLCN7-208	ENST00000564968	KRTAP5-2	Q701N4	177 aa		4.85	□□□□□ -1.63
CLCN7-208	ENST00000564968	KRTAP5-8	O75690	187 aa		4.84	□□□□□ -1.63
CLCN7-208	ENST00000564968	KRTAP6-1	Q3LI64	71 aa		4.8	□□□□□ -1.64
CLCN7-208	ENST00000564968		A0A0A0MQY5	61 aa		4.76	□□□□□ -1.65
CLCN7-208	ENST00000564968	MT1A	P04731	61 aa		4.76	□□□□□ -1.65
CLCN7-208	ENST00000564968	LCE3C	Q5T5A8	94 aa		4.72	□□□□□ -1.65
CLCN7-208	ENST00000564968	KRTAP19-4	Q3LI73	84 aa		4.71	□□□□□ -1.66
CLCN7-208	ENST00000564968	OBSCN	Q5VST9	7968 aa		4.68	□□□□□ -1.66
CLCN7-208	ENST00000564968	KRTAP9-9	Q9BYP9	154 aa		4.67	□□□□□ -1.66
CLCN7-208	ENST00000564968	KRTAP6-2	Q3LI66	62 aa		4.66	□□□□□ -1.66
CLCN7-208	ENST00000564968	KRTAP9-4	Q9BYQ2	154 aa		4.62	□□□□□ -1.67
CLCN7-208	ENST00000564968	KRTAP9-6	A8MVA2	160 aa		4.49	□□□□□ -1.69
CLCN7-208	ENST00000564968	KRTAP5-1	Q6L8H4	278 aa		4.44	□□□□□ -1.7
CLCN7-208	ENST00000564968	INE1	O15225	51 aa		4.38	□□□□□ -1.71
CLCN7-208	ENST00000564968	MT3	P25713	68 aa		4.37	□□□□□ -1.71
CLCN7-208	ENST00000564968	LCE1E	Q5T753	118 aa		4.04	□□□□□ -1.76
CLCN7-208	ENST00000564968	LCE1B	Q5T7P3	118 aa		3.98	□□□□□ -1.77
CLCN7-208	ENST00000564968	KRTAP4-2	Q9BYR5	136 aa		3.93	□□□□□ -1.78
CLCN7-208	ENST00000564968	KRTAP4-12	Q9BQ66	201 aa		3.78	□□□□□ -1.8
CLCN7-208	ENST00000564968	LCE1C	Q5T751	118 aa		3.77	□□□□□ -1.81
CLCN7-208	ENST00000564968	KRTAP5-11	Q6L8G4	156 aa		3.49	□□□□□ -1.85
CLCN7-208	ENST00000564968	LCE1F	Q5T754	118 aa		3.43	□□□□□ -1.86
CLCN7-208	ENST00000564968	PHGR1	C9JFL3	82 aa		3.4	□□□□□ -1.87
CLCN7-208	ENST00000564968	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.36	□□□□□ -1.87
CLCN7-208	ENST00000564968	LCE3D	Q9BYE3	92 aa		3.33	□□□□□ -1.88
CLCN7-208	ENST00000564968	LCE3E	Q5T5B0	92 aa		3.21	□□□□□ -1.9
CLCN7-208	ENST00000564968	KRTAP21-2	Q3LI59	83 aa		3.12	□□□□□ -1.91
CLCN7-208	ENST00000564968	PRM1	P04553	51 aa		3.03	□□□□□ -1.92
CLCN7-208	ENST00000564968	KRTAP4-4	Q9BYR3	166 aa		3.02	□□□□□ -1.93
CLCN7-208	ENST00000564968	MUC19	Q7Z5P9	8384 aa		2.93	□□□□□ -1.94
CLCN7-208	ENST00000564968	KRTAP21-1	Q3LI58	79 aa		2.55	□□□□□ -2
CLCN7-208	ENST00000564968	MUC16	Q8WXI7	14507 aa		2.04	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms