RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
CLN6-204ENST00000564752 MT1MQ8N339 61 aa6.58□□□□□ -1.36
CLN6-204ENST00000564752 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
CLN6-204ENST00000564752 UQCR11O14957 56 aa6.55□□□□□ -1.36
CLN6-204ENST00000564752 MT1LQ93083 61 aa6.55□□□□□ -1.36
CLN6-204ENST00000564752 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
CLN6-204ENST00000564752 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CLN6-204ENST00000564752 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
CLN6-204ENST00000564752 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
CLN6-204ENST00000564752 KRTAP4-6Q9BYQ5 205 aa6.35□□□□□ -1.39
CLN6-204ENST00000564752 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
CLN6-204ENST00000564752 K7ERS5 55 aa6.31□□□□□ -1.4
CLN6-204ENST00000564752 V9GYY9 64 aa6.3□□□□□ -1.4
CLN6-204ENST00000564752 PSPHP1O15172 72 aa6.28□□□□□ -1.4
CLN6-204ENST00000564752 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
CLN6-204ENST00000564752 KRTAP5-7Q6L8G8 165 aa6.26□□□□□ -1.41
CLN6-204ENST00000564752 Q1T7F1 81 aa6.23□□□□□ -1.41
CLN6-204ENST00000564752 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
CLN6-204ENST00000564752 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
CLN6-204ENST00000564752 PCP4P48539 62 aa6.16□□□□□ -1.42
CLN6-204ENST00000564752 A6NED7 52 aa6.08□□□□□ -1.44
CLN6-204ENST00000564752 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
CLN6-204ENST00000564752 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
CLN6-204ENST00000564752 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
CLN6-204ENST00000564752 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
CLN6-204ENST00000564752 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
CLN6-204ENST00000564752 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
CLN6-204ENST00000564752 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CLN6-204ENST00000564752 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
CLN6-204ENST00000564752 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
CLN6-204ENST00000564752 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
CLN6-204ENST00000564752 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
CLN6-204ENST00000564752 ROMO1P60602 79 aa5.85□□□□□ -1.47
CLN6-204ENST00000564752 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
CLN6-204ENST00000564752 KRTAP4-11Q9BYQ6 195 aa5.63□□□□□ -1.51
CLN6-204ENST00000564752 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
CLN6-204ENST00000564752 MT1AP04731 61 aa5.57□□□□□ -1.52
CLN6-204ENST00000564752 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
CLN6-204ENST00000564752 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
CLN6-204ENST00000564752 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
CLN6-204ENST00000564752 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
CLN6-204ENST00000564752 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
CLN6-204ENST00000564752 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
CLN6-204ENST00000564752 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CLN6-204ENST00000564752 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CLN6-204ENST00000564752 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
CLN6-204ENST00000564752 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
CLN6-204ENST00000564752 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
CLN6-204ENST00000564752 MT3P25713 68 aa5.11□□□□□ -1.59
CLN6-204ENST00000564752 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
CLN6-204ENST00000564752 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
CLN6-204ENST00000564752 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
CLN6-204ENST00000564752 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CLN6-204ENST00000564752 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
CLN6-204ENST00000564752 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
CLN6-204ENST00000564752 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
CLN6-204ENST00000564752 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CLN6-204ENST00000564752 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
CLN6-204ENST00000564752 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
CLN6-204ENST00000564752 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
CLN6-204ENST00000564752 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
CLN6-204ENST00000564752 H3BS24 57 aa4.11□□□□□ -1.75
CLN6-204ENST00000564752 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CLN6-204ENST00000564752 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
CLN6-204ENST00000564752 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
CLN6-204ENST00000564752 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
CLN6-204ENST00000564752 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
CLN6-204ENST00000564752 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
CLN6-204ENST00000564752 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
CLN6-204ENST00000564752 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CLN6-204ENST00000564752 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
CLN6-204ENST00000564752 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
CLN6-204ENST00000564752 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
CLN6-204ENST00000564752 PRM1P04553 51 aa2.99□□□□□ -1.93
CLN6-204ENST00000564752 INE1O15225 51 aa2.96□□□□□ -1.94
CLN6-204ENST00000564752 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CLN6-204ENST00000564752 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 63.8 ms