RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
GTF3C1-204ENST00000564664 SPRR2DP22532 72 aa4.86□□□□□ -1.63
GTF3C1-204ENST00000564664 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
GTF3C1-204ENST00000564664 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
GTF3C1-204ENST00000564664 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
GTF3C1-204ENST00000564664 A8MU10 97 aa4.82□□□□□ -1.64
GTF3C1-204ENST00000564664 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
GTF3C1-204ENST00000564664 A0A1B0GU33 70 aa4.76□□□□□ -1.65
GTF3C1-204ENST00000564664 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
GTF3C1-204ENST00000564664 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
GTF3C1-204ENST00000564664 K7ERS5 55 aa4.62□□□□□ -1.67
GTF3C1-204ENST00000564664 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
GTF3C1-204ENST00000564664 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
GTF3C1-204ENST00000564664 MT1EP04732 61 aa4.54□□□□□ -1.68
GTF3C1-204ENST00000564664 A0A0D9SG42 100 aa4.5□□□□□ -1.69
GTF3C1-204ENST00000564664 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
GTF3C1-204ENST00000564664 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
GTF3C1-204ENST00000564664 MT1GP13640 62 aa4.46□□□□□ -1.7
GTF3C1-204ENST00000564664 ROMO1P60602 79 aa4.44□□□□□ -1.7
GTF3C1-204ENST00000564664 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
GTF3C1-204ENST00000564664 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
GTF3C1-204ENST00000564664 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
GTF3C1-204ENST00000564664 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
GTF3C1-204ENST00000564664 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
GTF3C1-204ENST00000564664 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
GTF3C1-204ENST00000564664 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
GTF3C1-204ENST00000564664 MT1MQ8N339 61 aa4.33□□□□□ -1.72
GTF3C1-204ENST00000564664 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
GTF3C1-204ENST00000564664 MT1LQ93083 61 aa4.32□□□□□ -1.72
GTF3C1-204ENST00000564664 TNP1P09430 55 aa4.31□□□□□ -1.72
GTF3C1-204ENST00000564664 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
GTF3C1-204ENST00000564664 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
GTF3C1-204ENST00000564664 MT4P47944 62 aa4.24□□□□□ -1.73
GTF3C1-204ENST00000564664 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
GTF3C1-204ENST00000564664 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
GTF3C1-204ENST00000564664 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
GTF3C1-204ENST00000564664 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
GTF3C1-204ENST00000564664 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
GTF3C1-204ENST00000564664 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
GTF3C1-204ENST00000564664 KRTAP15-1Q3LI76 137 aa4.07□□□□□ -1.76
GTF3C1-204ENST00000564664 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
GTF3C1-204ENST00000564664 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
GTF3C1-204ENST00000564664 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
GTF3C1-204ENST00000564664 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
GTF3C1-204ENST00000564664 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
GTF3C1-204ENST00000564664 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
GTF3C1-204ENST00000564664 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
GTF3C1-204ENST00000564664 MT1AP04731 61 aa3.69□□□□□ -1.82
GTF3C1-204ENST00000564664 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
GTF3C1-204ENST00000564664 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
GTF3C1-204ENST00000564664 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
GTF3C1-204ENST00000564664 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
GTF3C1-204ENST00000564664 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
GTF3C1-204ENST00000564664 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
GTF3C1-204ENST00000564664 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
GTF3C1-204ENST00000564664 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
GTF3C1-204ENST00000564664 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
GTF3C1-204ENST00000564664 MT3P25713 68 aa3.41□□□□□ -1.86
GTF3C1-204ENST00000564664 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
GTF3C1-204ENST00000564664 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
GTF3C1-204ENST00000564664 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
GTF3C1-204ENST00000564664 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
GTF3C1-204ENST00000564664 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
GTF3C1-204ENST00000564664 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
GTF3C1-204ENST00000564664 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
GTF3C1-204ENST00000564664 INE1O15225 51 aa3.2□□□□□ -1.9
GTF3C1-204ENST00000564664 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
GTF3C1-204ENST00000564664 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
GTF3C1-204ENST00000564664 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
GTF3C1-204ENST00000564664 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
GTF3C1-204ENST00000564664 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
GTF3C1-204ENST00000564664 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
GTF3C1-204ENST00000564664 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
GTF3C1-204ENST00000564664 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
GTF3C1-204ENST00000564664 PRM1P04553 51 aa2.27□□□□□ -2.05
GTF3C1-204ENST00000564664 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
GTF3C1-204ENST00000564664 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
GTF3C1-204ENST00000564664 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 27.8 ms