RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 AHNAK2Q8IVF2 5795 aa7.29□□□□□ -1.24
SLX1A-204ENST00000563995 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
SLX1A-204ENST00000563995 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
SLX1A-204ENST00000563995 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
SLX1A-204ENST00000563995 KRTAP5-10Q6L8G5 202 aa7.23□□□□□ -1.25
SLX1A-204ENST00000563995 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
SLX1A-204ENST00000563995 MT1EP04732 61 aa7.21□□□□□ -1.26
SLX1A-204ENST00000563995 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
SLX1A-204ENST00000563995 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
SLX1A-204ENST00000563995 LCE5AQ5TCM9 118 aa7.1□□□□□ -1.27
SLX1A-204ENST00000563995 KRTAP5-7Q6L8G8 165 aa7.1□□□□□ -1.27
SLX1A-204ENST00000563995 KRTAP19-3Q7Z4W3 81 aa7.07□□□□□ -1.28
SLX1A-204ENST00000563995 MT4P47944 62 aa7.04□□□□□ -1.28
SLX1A-204ENST00000563995 ROMO1P60602 79 aa6.99□□□□□ -1.29
SLX1A-204ENST00000563995 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
SLX1A-204ENST00000563995 MT1LQ93083 61 aa6.96□□□□□ -1.3
SLX1A-204ENST00000563995 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
SLX1A-204ENST00000563995 MT1GP13640 62 aa6.94□□□□□ -1.3
SLX1A-204ENST00000563995 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
SLX1A-204ENST00000563995 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
SLX1A-204ENST00000563995 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
SLX1A-204ENST00000563995 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
SLX1A-204ENST00000563995 MT1MQ8N339 61 aa6.83□□□□□ -1.32
SLX1A-204ENST00000563995 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
SLX1A-204ENST00000563995 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
SLX1A-204ENST00000563995 KRTAP5-4Q6L8H1 288 aa6.65□□□□□ -1.34
SLX1A-204ENST00000563995 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.34
SLX1A-204ENST00000563995 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
SLX1A-204ENST00000563995 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
SLX1A-204ENST00000563995 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
SLX1A-204ENST00000563995 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
SLX1A-204ENST00000563995 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
SLX1A-204ENST00000563995 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
SLX1A-204ENST00000563995 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
SLX1A-204ENST00000563995 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
SLX1A-204ENST00000563995 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
SLX1A-204ENST00000563995 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
SLX1A-204ENST00000563995 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
SLX1A-204ENST00000563995 MUC5BQ9HC84 5762 aaPredicted RBP6.13□□□□□ -1.43
SLX1A-204ENST00000563995 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
SLX1A-204ENST00000563995 KRTAP9-6A8MVA2 160 aa6.07□□□□□ -1.44
SLX1A-204ENST00000563995 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
SLX1A-204ENST00000563995 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
SLX1A-204ENST00000563995 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
SLX1A-204ENST00000563995 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
SLX1A-204ENST00000563995 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
SLX1A-204ENST00000563995 MT1AP04731 61 aa5.92□□□□□ -1.46
SLX1A-204ENST00000563995 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
SLX1A-204ENST00000563995 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
SLX1A-204ENST00000563995 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
SLX1A-204ENST00000563995 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
SLX1A-204ENST00000563995 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SLX1A-204ENST00000563995 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
SLX1A-204ENST00000563995 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
SLX1A-204ENST00000563995 MT3P25713 68 aa5.4□□□□□ -1.54
SLX1A-204ENST00000563995 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
SLX1A-204ENST00000563995 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
SLX1A-204ENST00000563995 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
SLX1A-204ENST00000563995 H3BS24 57 aa4.81□□□□□ -1.64
SLX1A-204ENST00000563995 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
SLX1A-204ENST00000563995 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SLX1A-204ENST00000563995 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
SLX1A-204ENST00000563995 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
SLX1A-204ENST00000563995 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
SLX1A-204ENST00000563995 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SLX1A-204ENST00000563995 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
SLX1A-204ENST00000563995 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
SLX1A-204ENST00000563995 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
SLX1A-204ENST00000563995 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SLX1A-204ENST00000563995 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
SLX1A-204ENST00000563995 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
SLX1A-204ENST00000563995 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
SLX1A-204ENST00000563995 INE1O15225 51 aa3.65□□□□□ -1.83
SLX1A-204ENST00000563995 PRM1P04553 51 aa3.6□□□□□ -1.83
SLX1A-204ENST00000563995 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
SLX1A-204ENST00000563995 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
SLX1A-204ENST00000563995 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
SLX1A-204ENST00000563995 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms