RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
LINC01416-201ENST00000563553 DNAH11Q96DT5 4516 aa1.69□□□□□ -2.14
LINC01416-201ENST00000563553 PLECQ15149 4684 aaKnown RBP1.68□□□□□ -2.14
LINC01416-201ENST00000563553 KRTAP10-10P60014 251 aa1.66□□□□□ -2.14
LINC01416-201ENST00000563553 FLG2Q5D862 2391 aaPredicted RBP1.65□□□□□ -2.15
LINC01416-201ENST00000563553 COL7A1Q02388 2944 aa1.65□□□□□ -2.15
LINC01416-201ENST00000563553 DNAH5Q8TE73 4624 aa1.64□□□□□ -2.15
LINC01416-201ENST00000563553 CSMD3Q7Z407 3707 aa1.63□□□□□ -2.15
LINC01416-201ENST00000563553 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
LINC01416-201ENST00000563553 PKHD1L1Q86WI1 4243 aa1.63□□□□□ -2.15
LINC01416-201ENST00000563553 INE1O15225 51 aa1.61□□□□□ -2.15
LINC01416-201ENST00000563553 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
LINC01416-201ENST00000563553 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
LINC01416-201ENST00000563553 LRP1BQ9NZR2 4599 aa1.6□□□□□ -2.15
LINC01416-201ENST00000563553 R4GN34 69 aa1.6□□□□□ -2.15
LINC01416-201ENST00000563553 PKHD1P08F94 4074 aa1.58□□□□□ -2.16
LINC01416-201ENST00000563553 APOBP04114 4563 aaKnown RBP1.58□□□□□ -2.16
LINC01416-201ENST00000563553 PKD1P98161 4303 aa1.58□□□□□ -2.16
LINC01416-201ENST00000563553 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
LINC01416-201ENST00000563553 LRP1Q07954 4544 aaKnown RBP1.57□□□□□ -2.16
LINC01416-201ENST00000563553 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
LINC01416-201ENST00000563553 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
LINC01416-201ENST00000563553 Q5VSD8 79 aa1.56□□□□□ -2.16
LINC01416-201ENST00000563553 VPS13BQ7Z7G8 4022 aa1.55□□□□□ -2.16
LINC01416-201ENST00000563553 TNXBP22105 4242 aa1.55□□□□□ -2.16
LINC01416-201ENST00000563553 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
LINC01416-201ENST00000563553 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
LINC01416-201ENST00000563553 TNP1P09430 55 aa1.55□□□□□ -2.16
LINC01416-201ENST00000563553 FAT2Q9NYQ8 4349 aa1.55□□□□□ -2.16
LINC01416-201ENST00000563553 HSPG2P98160 4391 aa1.55□□□□□ -2.16
LINC01416-201ENST00000563553 FAT1Q14517 4588 aa1.53□□□□□ -2.16
LINC01416-201ENST00000563553 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
LINC01416-201ENST00000563553 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
LINC01416-201ENST00000563553 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
LINC01416-201ENST00000563553 USH2AO75445 5202 aa1.47□□□□□ -2.17
LINC01416-201ENST00000563553 MT1HL1P0DM35 61 aa1.45□□□□□ -2.18
LINC01416-201ENST00000563553 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
LINC01416-201ENST00000563553 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
LINC01416-201ENST00000563553 KRTAP19-2Q3LHN2 52 aa1.4□□□□□ -2.18
LINC01416-201ENST00000563553 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
LINC01416-201ENST00000563553 MUC17Q685J3 4493 aa1.37□□□□□ -2.19
LINC01416-201ENST00000563553 LRP2P98164 4655 aa1.36□□□□□ -2.19
LINC01416-201ENST00000563553 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
LINC01416-201ENST00000563553 KRTAP12-3P60328 96 aa1.33□□□□□ -2.2
LINC01416-201ENST00000563553 KRTAP19-8Q3LI54 63 aa1.31□□□□□ -2.2
LINC01416-201ENST00000563553 LPAP08519 4548 aa1.29□□□□□ -2.2
LINC01416-201ENST00000563553 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
LINC01416-201ENST00000563553 MT1XP80297 61 aa1.25□□□□□ -2.21
LINC01416-201ENST00000563553 M0R2T5 61 aa1.22□□□□□ -2.21
LINC01416-201ENST00000563553 MT2AP02795 61 aa1.22□□□□□ -2.21
LINC01416-201ENST00000563553 MT1BP07438 61 aa1.22□□□□□ -2.21
LINC01416-201ENST00000563553 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
LINC01416-201ENST00000563553 MT1FP04733 61 aa1.21□□□□□ -2.22
LINC01416-201ENST00000563553 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
LINC01416-201ENST00000563553 MT1HP80294 61 aa1.19□□□□□ -2.22
LINC01416-201ENST00000563553 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
LINC01416-201ENST00000563553 MT1EP04732 61 aa1.14□□□□□ -2.23
LINC01416-201ENST00000563553 SPRR2DP22532 72 aa1.12□□□□□ -2.23
LINC01416-201ENST00000563553 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
LINC01416-201ENST00000563553 MT1LQ93083 61 aa1.11□□□□□ -2.23
LINC01416-201ENST00000563553 SPRR2EP22531 72 aa1.1□□□□□ -2.23
LINC01416-201ENST00000563553 SPRR2BP35325 72 aa1.1□□□□□ -2.23
LINC01416-201ENST00000563553 SPRR2AP35326 72 aa1.1□□□□□ -2.23
LINC01416-201ENST00000563553 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
LINC01416-201ENST00000563553 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
LINC01416-201ENST00000563553 MT1AP04731 61 aa1.09□□□□□ -2.24
LINC01416-201ENST00000563553 MT1GP13640 62 aa1.02□□□□□ -2.25
LINC01416-201ENST00000563553 MT1MQ8N339 61 aa1□□□□□ -2.25
LINC01416-201ENST00000563553 PRM1P04553 51 aa0.99□□□□□ -2.25
LINC01416-201ENST00000563553 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
LINC01416-201ENST00000563553 SPRR2FQ96RM1 72 aa0.98□□□□□ -2.25
LINC01416-201ENST00000563553 KRTAP6-2Q3LI66 62 aa0.92□□□□□ -2.26
LINC01416-201ENST00000563553 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.26
LINC01416-201ENST00000563553 MT4P47944 62 aa0.89□□□□□ -2.27
LINC01416-201ENST00000563553 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.28
LINC01416-201ENST00000563553 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
LINC01416-201ENST00000563553 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms