RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 NDUFA1O15239 70 aa-0.81□□□□□ -2.54
HMGB1P33-201ENST00000563485 DEFB136Q30KP8 78 aa-0.81□□□□□ -2.54
HMGB1P33-201ENST00000563485 SNRPGP15A8MWD9 76 aa-0.82□□□□□ -2.54
HMGB1P33-201ENST00000563485 MYO15AQ9UKN7 3530 aa-0.84□□□□□ -2.54
HMGB1P33-201ENST00000563485 CEP250Q9BV73 2442 aa-0.84□□□□□ -2.54
HMGB1P33-201ENST00000563485 DEFB4AO15263 64 aa-0.87□□□□□ -2.55
HMGB1P33-201ENST00000563485 MT1BP07438 61 aa-0.87□□□□□ -2.55
HMGB1P33-201ENST00000563485 DMDP11532 3685 aa-0.88□□□□□ -2.55
HMGB1P33-201ENST00000563485 PCNTO95613 3336 aa-0.89□□□□□ -2.55
HMGB1P33-201ENST00000563485 BOD1L1Q8NFC6 3051 aa-0.9□□□□□ -2.55
HMGB1P33-201ENST00000563485 WDFY3Q8IZQ1 3526 aa-0.91□□□□□ -2.55
HMGB1P33-201ENST00000563485 IQGAP2Q13576 1575 aa-0.91□□□□□ -2.56
HMGB1P33-201ENST00000563485 CEP350Q5VT06 3117 aa-0.93□□□□□ -2.56
HMGB1P33-201ENST00000563485 ATP7AQ04656 1500 aa-0.94□□□□□ -2.56
HMGB1P33-201ENST00000563485 SAMD9LQ8IVG5 1584 aa-0.94□□□□□ -2.56
HMGB1P33-201ENST00000563485 RPS29P62273 56 aaKnown RBP-0.95□□□□□ -2.56
HMGB1P33-201ENST00000563485 SZT2Q5T011 3432 aa-0.95□□□□□ -2.56
HMGB1P33-201ENST00000563485 WDFY4Q6ZS81 3184 aa-0.96□□□□□ -2.56
HMGB1P33-201ENST00000563485 MUC3AQ02505 3323 aa-0.97□□□□□ -2.56
HMGB1P33-201ENST00000563485 DNAH12Q6ZR08 3092 aa-0.97□□□□□ -2.56
HMGB1P33-201ENST00000563485 LINC01590Q5TEZ4 76 aa-0.98□□□□□ -2.57
HMGB1P33-201ENST00000563485 KRTAP20-1Q3LI63 56 aa-1□□□□□ -2.57
HMGB1P33-201ENST00000563485 TOMM5Q8N4H5 51 aa-1□□□□□ -2.57
HMGB1P33-201ENST00000563485 SPEGQ15772 3267 aa-1.01□□□□□ -2.57
HMGB1P33-201ENST00000563485 TOMM7Q9P0U1 55 aa-1.01□□□□□ -2.57
HMGB1P33-201ENST00000563485 CENPEQ02224 2701 aa-1.02□□□□□ -2.57
HMGB1P33-201ENST00000563485 DUOX1Q9NRD9 1551 aa-1.03□□□□□ -2.57
HMGB1P33-201ENST00000563485 MT1FP04733 61 aa-1.03□□□□□ -2.57
HMGB1P33-201ENST00000563485 MKI67P46013 3256 aaKnown RBP-1.04□□□□□ -2.58
HMGB1P33-201ENST00000563485 RPL39P62891 51 aaKnown RBP-1.06□□□□□ -2.58
HMGB1P33-201ENST00000563485 RHPN1-AS1Q9BWJ2 59 aa-1.06□□□□□ -2.58
HMGB1P33-201ENST00000563485 XIRP2A4UGR9 3374 aa-1.07□□□□□ -2.58
HMGB1P33-201ENST00000563485 MROH2BQ7Z745 1585 aa-1.09□□□□□ -2.58
HMGB1P33-201ENST00000563485 TOP2AP11388 1531 aaKnown RBP-1.1□□□□□ -2.58
HMGB1P33-201ENST00000563485 EP400Q96L91 3159 aa-1.1□□□□□ -2.58
HMGB1P33-201ENST00000563485 DCHS1Q96JQ0 3298 aa-1.1□□□□□ -2.59
HMGB1P33-201ENST00000563485 RPL39LQ96EH5 51 aaKnown RBP-1.13□□□□□ -2.59
HMGB1P33-201ENST00000563485 DEFB133Q30KQ1 61 aa-1.15□□□□□ -2.59
HMGB1P33-201ENST00000563485 USP34Q70CQ2 3546 aa-1.15□□□□□ -2.59
HMGB1P33-201ENST00000563485 UNC80Q8N2C7 3258 aa-1.16□□□□□ -2.59
HMGB1P33-201ENST00000563485 LOC400499M0QZD8 3231 aa-1.16□□□□□ -2.59
HMGB1P33-201ENST00000563485 DEFB124Q8NES8 71 aa-1.16□□□□□ -2.6
HMGB1P33-201ENST00000563485 CFAP47Q6ZTR5 3102 aa-1.18□□□□□ -2.6
HMGB1P33-201ENST00000563485 DNAH14Q0VDD8 3507 aa-1.22□□□□□ -2.6
HMGB1P33-201ENST00000563485 A0A096LNI7 61 aa-1.22□□□□□ -2.6
HMGB1P33-201ENST00000563485 CD52P31358 61 aa-1.23□□□□□ -2.61
HMGB1P33-201ENST00000563485 ASPMQ8IZT6 3477 aa-1.24□□□□□ -2.61
HMGB1P33-201ENST00000563485 HTN1P15515 57 aa-1.24□□□□□ -2.61
HMGB1P33-201ENST00000563485 H3BUX3 64 aa-1.26□□□□□ -2.61
HMGB1P33-201ENST00000563485 TTTY10Q9BZA0 68 aa-1.27□□□□□ -2.61
HMGB1P33-201ENST00000563485 SNRPGP62308 76 aaKnown RBP-1.29□□□□□ -2.62
HMGB1P33-201ENST00000563485 KRTAP19-6Q3LI70 58 aa-1.29□□□□□ -2.62
HMGB1P33-201ENST00000563485 K7EIM0 57 aa-1.3□□□□□ -2.62
HMGB1P33-201ENST00000563485 GCC2Q8IWJ2 1684 aa-1.3□□□□□ -2.62
HMGB1P33-201ENST00000563485 BRCA2P51587 3418 aa-1.3□□□□□ -2.62
HMGB1P33-201ENST00000563485 KRTAP19-2Q3LHN2 52 aa-1.31□□□□□ -2.62
HMGB1P33-201ENST00000563485 DEFB104AQ8WTQ1 72 aa-1.31□□□□□ -2.62
HMGB1P33-201ENST00000563485 VCANP13611 3396 aa-1.34□□□□□ -2.62
HMGB1P33-201ENST00000563485 CENPFP49454 3210 aa-1.39□□□□□ -2.63
HMGB1P33-201ENST00000563485 PRCDQ00LT1 54 aa-1.39□□□□□ -2.63
HMGB1P33-201ENST00000563485 CDH23Q9H251 3354 aa-1.4□□□□□ -2.63
HMGB1P33-201ENST00000563485 ARHGAP5-AS1Q96IT6 56 aa-1.41□□□□□ -2.64
HMGB1P33-201ENST00000563485 VPS13AQ96RL7 3174 aa-1.43□□□□□ -2.64
HMGB1P33-201ENST00000563485 LINC01556Q5JQF7 62 aa-1.45□□□□□ -2.64
HMGB1P33-201ENST00000563485 TMEM167AQ8TBQ9 72 aa-1.49□□□□□ -2.65
HMGB1P33-201ENST00000563485 UTRNP46939 3433 aa-1.56□□□□□ -2.66
HMGB1P33-201ENST00000563485 A0A096LPF7 62 aa-1.58□□□□□ -2.66
HMGB1P33-201ENST00000563485 RPL39P5Q59GN2 51 aa-1.63□□□□□ -2.67
HMGB1P33-201ENST00000563485 APELAP0DMC3 54 aa-1.65□□□□□ -2.67
HMGB1P33-201ENST00000563485 Q9Y3F1 56 aa-1.66□□□□□ -2.68
HMGB1P33-201ENST00000563485 H3BSH0 61 aa-1.68□□□□□ -2.68
HMGB1P33-201ENST00000563485 DEFB108AA8MXU0 73 aa-1.7□□□□□ -2.68
HMGB1P33-201ENST00000563485 GOLGB1Q14789 3259 aaKnown RBP-1.71□□□□□ -2.68
HMGB1P33-201ENST00000563485 HTN3P15516 51 aa-1.8□□□□□ -2.7
HMGB1P33-201ENST00000563485 COX14Q96I36 57 aa-1.88□□□□□ -2.71
HMGB1P33-201ENST00000563485 DEFB108BQ8NET1 73 aa-2□□□□□ -2.73
HMGB1P33-201ENST00000563485 STATHP02808 62 aa-2.28□□□□□ -2.77
Retrieved 77 of 20,778 RNA–protein pairs in 66.6 ms