RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 A8MU10 97 aa7.22□□□□□ -1.25
CHD9-208ENST00000563410 KRTAP5-10Q6L8G5 202 aa7.2□□□□□ -1.26
CHD9-208ENST00000563410 TNP1P09430 55 aa7.17□□□□□ -1.26
CHD9-208ENST00000563410 A0A1B0GU69 56 aa7.16□□□□□ -1.26
CHD9-208ENST00000563410 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
CHD9-208ENST00000563410 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
CHD9-208ENST00000563410 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
CHD9-208ENST00000563410 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
CHD9-208ENST00000563410 KRTAP5-3Q6L8H2 238 aa6.96□□□□□ -1.3
CHD9-208ENST00000563410 KRTAP5-7Q6L8G8 165 aa6.95□□□□□ -1.3
CHD9-208ENST00000563410 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
CHD9-208ENST00000563410 KRTAP5-5Q701N2 237 aaPredicted RBP6.91□□□□□ -1.3
CHD9-208ENST00000563410 TMEM258P61165 79 aa6.87□□□□□ -1.31
CHD9-208ENST00000563410 SPRR5A0A1B0GTR4 108 aa6.84□□□□□ -1.31
CHD9-208ENST00000563410 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
CHD9-208ENST00000563410 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
CHD9-208ENST00000563410 KRTAP12-4P60329 112 aa6.74□□□□□ -1.33
CHD9-208ENST00000563410 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
CHD9-208ENST00000563410 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
CHD9-208ENST00000563410 UQCR11O14957 56 aa6.62□□□□□ -1.35
CHD9-208ENST00000563410 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
CHD9-208ENST00000563410 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
CHD9-208ENST00000563410 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
CHD9-208ENST00000563410 V9GYY9 64 aa6.47□□□□□ -1.37
CHD9-208ENST00000563410 PSPHP1O15172 72 aa6.44□□□□□ -1.38
CHD9-208ENST00000563410 Q1T7F1 81 aa6.44□□□□□ -1.38
CHD9-208ENST00000563410 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CHD9-208ENST00000563410 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
CHD9-208ENST00000563410 KRTAP4-11Q9BYQ6 195 aa6.38□□□□□ -1.39
CHD9-208ENST00000563410 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
CHD9-208ENST00000563410 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
CHD9-208ENST00000563410 K7ERS5 55 aa6.33□□□□□ -1.4
CHD9-208ENST00000563410 MT1AP04731 61 aa6.32□□□□□ -1.4
CHD9-208ENST00000563410 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
CHD9-208ENST00000563410 PCP4P48539 62 aa6.26□□□□□ -1.41
CHD9-208ENST00000563410 A6NED7 52 aa6.22□□□□□ -1.41
CHD9-208ENST00000563410 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
CHD9-208ENST00000563410 KRTAP5-8O75690 187 aa6.19□□□□□ -1.42
CHD9-208ENST00000563410 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
CHD9-208ENST00000563410 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
CHD9-208ENST00000563410 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
CHD9-208ENST00000563410 MUC5BQ9HC84 5762 aaPredicted RBP6.1□□□□□ -1.43
CHD9-208ENST00000563410 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
CHD9-208ENST00000563410 AHNAKQ09666 5890 aaKnown RBP6.07□□□□□ -1.44
CHD9-208ENST00000563410 MUC5ACP98088 5654 aa6.06□□□□□ -1.44
CHD9-208ENST00000563410 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
CHD9-208ENST00000563410 ROMO1P60602 79 aa5.92□□□□□ -1.46
CHD9-208ENST00000563410 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
CHD9-208ENST00000563410 MT3P25713 68 aa5.78□□□□□ -1.48
CHD9-208ENST00000563410 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
CHD9-208ENST00000563410 BRK1Q8WUW1 75 aa5.48□□□□□ -1.53
CHD9-208ENST00000563410 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
CHD9-208ENST00000563410 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CHD9-208ENST00000563410 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
CHD9-208ENST00000563410 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
CHD9-208ENST00000563410 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
CHD9-208ENST00000563410 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
CHD9-208ENST00000563410 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
CHD9-208ENST00000563410 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
CHD9-208ENST00000563410 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
CHD9-208ENST00000563410 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
CHD9-208ENST00000563410 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
CHD9-208ENST00000563410 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
CHD9-208ENST00000563410 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CHD9-208ENST00000563410 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
CHD9-208ENST00000563410 H3BS24 57 aa4.36□□□□□ -1.71
CHD9-208ENST00000563410 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
CHD9-208ENST00000563410 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
CHD9-208ENST00000563410 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
CHD9-208ENST00000563410 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
CHD9-208ENST00000563410 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
CHD9-208ENST00000563410 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
CHD9-208ENST00000563410 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
CHD9-208ENST00000563410 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CHD9-208ENST00000563410 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
CHD9-208ENST00000563410 PRM1P04553 51 aa3.04□□□□□ -1.92
CHD9-208ENST00000563410 INE1O15225 51 aa2.75□□□□□ -1.97
CHD9-208ENST00000563410 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 131.6 ms