RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
LPCAT4-204ENST00000563240 MT4P47944 62 aa5.31□□□□□ -1.56
LPCAT4-204ENST00000563240 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
LPCAT4-204ENST00000563240 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
LPCAT4-204ENST00000563240 PCP4P48539 62 aa5.26□□□□□ -1.57
LPCAT4-204ENST00000563240 UQCR11O14957 56 aa5.22□□□□□ -1.57
LPCAT4-204ENST00000563240 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
LPCAT4-204ENST00000563240 KRTAP12-3P60328 96 aa5.21□□□□□ -1.58
LPCAT4-204ENST00000563240 TMEM258P61165 79 aa5.2□□□□□ -1.58
LPCAT4-204ENST00000563240 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
LPCAT4-204ENST00000563240 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
LPCAT4-204ENST00000563240 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
LPCAT4-204ENST00000563240 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
LPCAT4-204ENST00000563240 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
LPCAT4-204ENST00000563240 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
LPCAT4-204ENST00000563240 K7ERS5 55 aa5.03□□□□□ -1.6
LPCAT4-204ENST00000563240 PSPHP1O15172 72 aa5.02□□□□□ -1.61
LPCAT4-204ENST00000563240 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
LPCAT4-204ENST00000563240 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
LPCAT4-204ENST00000563240 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
LPCAT4-204ENST00000563240 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
LPCAT4-204ENST00000563240 V9GYY9 64 aa4.94□□□□□ -1.62
LPCAT4-204ENST00000563240 Q1T7F1 81 aa4.91□□□□□ -1.62
LPCAT4-204ENST00000563240 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
LPCAT4-204ENST00000563240 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
LPCAT4-204ENST00000563240 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
LPCAT4-204ENST00000563240 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
LPCAT4-204ENST00000563240 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
LPCAT4-204ENST00000563240 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
LPCAT4-204ENST00000563240 A6NED7 52 aa4.82□□□□□ -1.64
LPCAT4-204ENST00000563240 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
LPCAT4-204ENST00000563240 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
LPCAT4-204ENST00000563240 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
LPCAT4-204ENST00000563240 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
LPCAT4-204ENST00000563240 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
LPCAT4-204ENST00000563240 ROMO1P60602 79 aa4.67□□□□□ -1.66
LPCAT4-204ENST00000563240 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
LPCAT4-204ENST00000563240 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
LPCAT4-204ENST00000563240 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
LPCAT4-204ENST00000563240 MT1AP04731 61 aa4.6□□□□□ -1.67
LPCAT4-204ENST00000563240 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
LPCAT4-204ENST00000563240 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
LPCAT4-204ENST00000563240 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
LPCAT4-204ENST00000563240 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
LPCAT4-204ENST00000563240 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
LPCAT4-204ENST00000563240 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
LPCAT4-204ENST00000563240 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
LPCAT4-204ENST00000563240 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
LPCAT4-204ENST00000563240 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
LPCAT4-204ENST00000563240 MT3P25713 68 aa4.22□□□□□ -1.73
LPCAT4-204ENST00000563240 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
LPCAT4-204ENST00000563240 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
LPCAT4-204ENST00000563240 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
LPCAT4-204ENST00000563240 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
LPCAT4-204ENST00000563240 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
LPCAT4-204ENST00000563240 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
LPCAT4-204ENST00000563240 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
LPCAT4-204ENST00000563240 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
LPCAT4-204ENST00000563240 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
LPCAT4-204ENST00000563240 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
LPCAT4-204ENST00000563240 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
LPCAT4-204ENST00000563240 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
LPCAT4-204ENST00000563240 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
LPCAT4-204ENST00000563240 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
LPCAT4-204ENST00000563240 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
LPCAT4-204ENST00000563240 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
LPCAT4-204ENST00000563240 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
LPCAT4-204ENST00000563240 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
LPCAT4-204ENST00000563240 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
LPCAT4-204ENST00000563240 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
LPCAT4-204ENST00000563240 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
LPCAT4-204ENST00000563240 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
LPCAT4-204ENST00000563240 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
LPCAT4-204ENST00000563240 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
LPCAT4-204ENST00000563240 INE1O15225 51 aa2.57□□□□□ -2
LPCAT4-204ENST00000563240 PRM1P04553 51 aa2.41□□□□□ -2.02
LPCAT4-204ENST00000563240 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
LPCAT4-204ENST00000563240 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms