RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 PRR15LQ9BU68 103 aa5.86□□□□□ -1.47
TNRC6A-209ENST00000562829 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
TNRC6A-209ENST00000562829 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
TNRC6A-209ENST00000562829 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
TNRC6A-209ENST00000562829 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
TNRC6A-209ENST00000562829 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
TNRC6A-209ENST00000562829 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
TNRC6A-209ENST00000562829 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
TNRC6A-209ENST00000562829 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
TNRC6A-209ENST00000562829 UQCR11O14957 56 aa5.64□□□□□ -1.51
TNRC6A-209ENST00000562829 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
TNRC6A-209ENST00000562829 KRTAP5-10Q6L8G5 202 aa5.56□□□□□ -1.52
TNRC6A-209ENST00000562829 TMEM258P61165 79 aa5.55□□□□□ -1.52
TNRC6A-209ENST00000562829 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
TNRC6A-209ENST00000562829 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
TNRC6A-209ENST00000562829 K7ERS5 55 aa5.46□□□□□ -1.54
TNRC6A-209ENST00000562829 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
TNRC6A-209ENST00000562829 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
TNRC6A-209ENST00000562829 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
TNRC6A-209ENST00000562829 KRTAP4-12Q9BQ66 201 aa5.43□□□□□ -1.54
TNRC6A-209ENST00000562829 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
TNRC6A-209ENST00000562829 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
TNRC6A-209ENST00000562829 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
TNRC6A-209ENST00000562829 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
TNRC6A-209ENST00000562829 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
TNRC6A-209ENST00000562829 PSPHP1O15172 72 aa5.33□□□□□ -1.56
TNRC6A-209ENST00000562829 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
TNRC6A-209ENST00000562829 V9GYY9 64 aa5.3□□□□□ -1.56
TNRC6A-209ENST00000562829 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
TNRC6A-209ENST00000562829 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
TNRC6A-209ENST00000562829 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
TNRC6A-209ENST00000562829 Q1T7F1 81 aa5.22□□□□□ -1.57
TNRC6A-209ENST00000562829 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
TNRC6A-209ENST00000562829 A6NED7 52 aa5.15□□□□□ -1.59
TNRC6A-209ENST00000562829 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
TNRC6A-209ENST00000562829 MT1AP04731 61 aa5.08□□□□□ -1.6
TNRC6A-209ENST00000562829 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
TNRC6A-209ENST00000562829 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
TNRC6A-209ENST00000562829 ROMO1P60602 79 aa5.02□□□□□ -1.61
TNRC6A-209ENST00000562829 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
TNRC6A-209ENST00000562829 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
TNRC6A-209ENST00000562829 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
TNRC6A-209ENST00000562829 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
TNRC6A-209ENST00000562829 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
TNRC6A-209ENST00000562829 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
TNRC6A-209ENST00000562829 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
TNRC6A-209ENST00000562829 MT3P25713 68 aa4.65□□□□□ -1.67
TNRC6A-209ENST00000562829 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
TNRC6A-209ENST00000562829 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
TNRC6A-209ENST00000562829 PCP4P48539 62 aa4.56□□□□□ -1.68
TNRC6A-209ENST00000562829 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
TNRC6A-209ENST00000562829 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
TNRC6A-209ENST00000562829 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
TNRC6A-209ENST00000562829 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
TNRC6A-209ENST00000562829 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
TNRC6A-209ENST00000562829 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
TNRC6A-209ENST00000562829 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
TNRC6A-209ENST00000562829 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
TNRC6A-209ENST00000562829 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
TNRC6A-209ENST00000562829 H3BS24 57 aa3.71□□□□□ -1.82
TNRC6A-209ENST00000562829 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
TNRC6A-209ENST00000562829 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
TNRC6A-209ENST00000562829 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
TNRC6A-209ENST00000562829 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
TNRC6A-209ENST00000562829 PRO0628Q9UI54 55 aa3.44□□□□□ -1.86
TNRC6A-209ENST00000562829 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
TNRC6A-209ENST00000562829 SVIPQ8NHG7 77 aa3.35□□□□□ -1.87
TNRC6A-209ENST00000562829 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
TNRC6A-209ENST00000562829 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
TNRC6A-209ENST00000562829 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
TNRC6A-209ENST00000562829 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
TNRC6A-209ENST00000562829 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
TNRC6A-209ENST00000562829 A0A0A0MQY5 61 aa2.57□□□□□ -2
TNRC6A-209ENST00000562829 PRM1P04553 51 aa2.57□□□□□ -2
TNRC6A-209ENST00000562829 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
TNRC6A-209ENST00000562829 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
TNRC6A-209ENST00000562829 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
TNRC6A-209ENST00000562829 INE1O15225 51 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 58.9 ms