RNA–Protein interactions for RNA: ENST00000562792.1

TRAPPC2L-204, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 4

Gene TRAPPC2L, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-204ENST00000562792 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
TRAPPC2L-204ENST00000562792 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
TRAPPC2L-204ENST00000562792 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
TRAPPC2L-204ENST00000562792 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
TRAPPC2L-204ENST00000562792 V9GYY9 64 aa4.89□□□□□ -1.63
TRAPPC2L-204ENST00000562792 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
TRAPPC2L-204ENST00000562792 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
TRAPPC2L-204ENST00000562792 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
TRAPPC2L-204ENST00000562792 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
TRAPPC2L-204ENST00000562792 Q1T7F1 81 aa4.86□□□□□ -1.63
TRAPPC2L-204ENST00000562792 UQCR11O14957 56 aa4.82□□□□□ -1.64
TRAPPC2L-204ENST00000562792 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
TRAPPC2L-204ENST00000562792 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
TRAPPC2L-204ENST00000562792 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
TRAPPC2L-204ENST00000562792 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
TRAPPC2L-204ENST00000562792 A8MU10 97 aa4.8□□□□□ -1.64
TRAPPC2L-204ENST00000562792 PSPHP1O15172 72 aa4.8□□□□□ -1.64
TRAPPC2L-204ENST00000562792 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
TRAPPC2L-204ENST00000562792 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
TRAPPC2L-204ENST00000562792 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
TRAPPC2L-204ENST00000562792 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC2L-204ENST00000562792 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
TRAPPC2L-204ENST00000562792 A6NED7 52 aa4.66□□□□□ -1.66
TRAPPC2L-204ENST00000562792 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
TRAPPC2L-204ENST00000562792 K7ERS5 55 aa4.61□□□□□ -1.67
TRAPPC2L-204ENST00000562792 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
TRAPPC2L-204ENST00000562792 TNP1P09430 55 aa4.52□□□□□ -1.69
TRAPPC2L-204ENST00000562792 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
TRAPPC2L-204ENST00000562792 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
TRAPPC2L-204ENST00000562792 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
TRAPPC2L-204ENST00000562792 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC2L-204ENST00000562792 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
TRAPPC2L-204ENST00000562792 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
TRAPPC2L-204ENST00000562792 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
TRAPPC2L-204ENST00000562792 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
TRAPPC2L-204ENST00000562792 ROMO1P60602 79 aa4.34□□□□□ -1.71
TRAPPC2L-204ENST00000562792 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
TRAPPC2L-204ENST00000562792 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
TRAPPC2L-204ENST00000562792 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
TRAPPC2L-204ENST00000562792 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TRAPPC2L-204ENST00000562792 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
TRAPPC2L-204ENST00000562792 MT1AP04731 61 aa4.2□□□□□ -1.74
TRAPPC2L-204ENST00000562792 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
TRAPPC2L-204ENST00000562792 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
TRAPPC2L-204ENST00000562792 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
TRAPPC2L-204ENST00000562792 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
TRAPPC2L-204ENST00000562792 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
TRAPPC2L-204ENST00000562792 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
TRAPPC2L-204ENST00000562792 PRO0628Q9UI54 55 aa4.04□□□□□ -1.76
TRAPPC2L-204ENST00000562792 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
TRAPPC2L-204ENST00000562792 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
TRAPPC2L-204ENST00000562792 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
TRAPPC2L-204ENST00000562792 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
TRAPPC2L-204ENST00000562792 MT3P25713 68 aa3.8□□□□□ -1.8
TRAPPC2L-204ENST00000562792 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
TRAPPC2L-204ENST00000562792 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
TRAPPC2L-204ENST00000562792 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
TRAPPC2L-204ENST00000562792 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
TRAPPC2L-204ENST00000562792 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
TRAPPC2L-204ENST00000562792 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
TRAPPC2L-204ENST00000562792 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TRAPPC2L-204ENST00000562792 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
TRAPPC2L-204ENST00000562792 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
TRAPPC2L-204ENST00000562792 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
TRAPPC2L-204ENST00000562792 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
TRAPPC2L-204ENST00000562792 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
TRAPPC2L-204ENST00000562792 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
TRAPPC2L-204ENST00000562792 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
TRAPPC2L-204ENST00000562792 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
TRAPPC2L-204ENST00000562792 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
TRAPPC2L-204ENST00000562792 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TRAPPC2L-204ENST00000562792 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
TRAPPC2L-204ENST00000562792 H3BS24 57 aa2.46□□□□□ -2.02
TRAPPC2L-204ENST00000562792 A0A0A0MQY5 61 aa2.44□□□□□ -2.02
TRAPPC2L-204ENST00000562792 INE1O15225 51 aa2.37□□□□□ -2.03
TRAPPC2L-204ENST00000562792 PRM1P04553 51 aa2.22□□□□□ -2.05
TRAPPC2L-204ENST00000562792 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TRAPPC2L-204ENST00000562792 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 86.7 ms