RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
CMTM3-204ENST00000562357 MT1MQ8N339 61 aa6.31□□□□□ -1.4
CMTM3-204ENST00000562357 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
CMTM3-204ENST00000562357 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
CMTM3-204ENST00000562357 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
CMTM3-204ENST00000562357 K7ERS5 55 aa6.23□□□□□ -1.41
CMTM3-204ENST00000562357 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
CMTM3-204ENST00000562357 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.42
CMTM3-204ENST00000562357 V9GYY9 64 aa6.19□□□□□ -1.42
CMTM3-204ENST00000562357 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
CMTM3-204ENST00000562357 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
CMTM3-204ENST00000562357 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CMTM3-204ENST00000562357 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
CMTM3-204ENST00000562357 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
CMTM3-204ENST00000562357 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CMTM3-204ENST00000562357 MT4P47944 62 aa6.08□□□□□ -1.44
CMTM3-204ENST00000562357 Q1T7F1 81 aa6.07□□□□□ -1.44
CMTM3-204ENST00000562357 KRTAP5-4Q6L8H1 288 aa5.99□□□□□ -1.45
CMTM3-204ENST00000562357 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
CMTM3-204ENST00000562357 A6NED7 52 aa5.95□□□□□ -1.46
CMTM3-204ENST00000562357 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
CMTM3-204ENST00000562357 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
CMTM3-204ENST00000562357 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
CMTM3-204ENST00000562357 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
CMTM3-204ENST00000562357 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
CMTM3-204ENST00000562357 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
CMTM3-204ENST00000562357 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
CMTM3-204ENST00000562357 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
CMTM3-204ENST00000562357 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
CMTM3-204ENST00000562357 ROMO1P60602 79 aa5.72□□□□□ -1.49
CMTM3-204ENST00000562357 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
CMTM3-204ENST00000562357 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
CMTM3-204ENST00000562357 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
CMTM3-204ENST00000562357 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
CMTM3-204ENST00000562357 PCP4P48539 62 aa5.66□□□□□ -1.5
CMTM3-204ENST00000562357 MUC5BQ9HC84 5762 aaPredicted RBP5.52□□□□□ -1.53
CMTM3-204ENST00000562357 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
CMTM3-204ENST00000562357 MUC5ACP98088 5654 aa5.48□□□□□ -1.53
CMTM3-204ENST00000562357 MT1AP04731 61 aa5.41□□□□□ -1.54
CMTM3-204ENST00000562357 H3BS24 57 aa5.36□□□□□ -1.55
CMTM3-204ENST00000562357 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
CMTM3-204ENST00000562357 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
CMTM3-204ENST00000562357 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
CMTM3-204ENST00000562357 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
CMTM3-204ENST00000562357 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CMTM3-204ENST00000562357 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
CMTM3-204ENST00000562357 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
CMTM3-204ENST00000562357 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
CMTM3-204ENST00000562357 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
CMTM3-204ENST00000562357 MT3P25713 68 aa4.98□□□□□ -1.61
CMTM3-204ENST00000562357 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
CMTM3-204ENST00000562357 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
CMTM3-204ENST00000562357 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
CMTM3-204ENST00000562357 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
CMTM3-204ENST00000562357 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CMTM3-204ENST00000562357 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CMTM3-204ENST00000562357 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
CMTM3-204ENST00000562357 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
CMTM3-204ENST00000562357 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
CMTM3-204ENST00000562357 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CMTM3-204ENST00000562357 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
CMTM3-204ENST00000562357 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
CMTM3-204ENST00000562357 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CMTM3-204ENST00000562357 A0A0A0MQY5 61 aa4□□□□□ -1.77
CMTM3-204ENST00000562357 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
CMTM3-204ENST00000562357 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CMTM3-204ENST00000562357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
CMTM3-204ENST00000562357 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
CMTM3-204ENST00000562357 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
CMTM3-204ENST00000562357 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
CMTM3-204ENST00000562357 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
CMTM3-204ENST00000562357 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
CMTM3-204ENST00000562357 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CMTM3-204ENST00000562357 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
CMTM3-204ENST00000562357 PRM1P04553 51 aa2.9□□□□□ -1.95
CMTM3-204ENST00000562357 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CMTM3-204ENST00000562357 INE1O15225 51 aa2.72□□□□□ -1.97
CMTM3-204ENST00000562357 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms