RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 KRTAP4-3Q9BYR4 195 aa8.1□□□□□ -1.11
TMEM170A-202ENST00000561878 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
TMEM170A-202ENST00000561878 HMCN1Q96RW7 5635 aa8.05□□□□□ -1.12
TMEM170A-202ENST00000561878 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
TMEM170A-202ENST00000561878 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
TMEM170A-202ENST00000561878 UQCR11O14957 56 aa7.98□□□□□ -1.13
TMEM170A-202ENST00000561878 TMEM258P61165 79 aa7.9□□□□□ -1.14
TMEM170A-202ENST00000561878 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
TMEM170A-202ENST00000561878 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
TMEM170A-202ENST00000561878 AHNAK2Q8IVF2 5795 aa7.8□□□□□ -1.16
TMEM170A-202ENST00000561878 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
TMEM170A-202ENST00000561878 MIR22HGQ0VDD5 57 aa7.76□□□□□ -1.17
TMEM170A-202ENST00000561878 KRTAP5-10Q6L8G5 202 aa7.73□□□□□ -1.17
TMEM170A-202ENST00000561878 K7ERS5 55 aa7.72□□□□□ -1.17
TMEM170A-202ENST00000561878 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
TMEM170A-202ENST00000561878 KRTAP20-2Q3LI61 65 aa7.6□□□□□ -1.19
TMEM170A-202ENST00000561878 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
TMEM170A-202ENST00000561878 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
TMEM170A-202ENST00000561878 V9GYY9 64 aa7.56□□□□□ -1.2
TMEM170A-202ENST00000561878 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
TMEM170A-202ENST00000561878 KRTAP5-3Q6L8H2 238 aa7.54□□□□□ -1.2
TMEM170A-202ENST00000561878 PSPHP1O15172 72 aa7.5□□□□□ -1.21
TMEM170A-202ENST00000561878 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
TMEM170A-202ENST00000561878 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
TMEM170A-202ENST00000561878 KRTAP5-7Q6L8G8 165 aa7.47□□□□□ -1.21
TMEM170A-202ENST00000561878 Q1T7F1 81 aa7.44□□□□□ -1.22
TMEM170A-202ENST00000561878 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
TMEM170A-202ENST00000561878 LCE3CQ5T5A8 94 aa7.34□□□□□ -1.23
TMEM170A-202ENST00000561878 SYNE1Q8NF91 8797 aaKnown RBP7.32□□□□□ -1.24
TMEM170A-202ENST00000561878 A6NED7 52 aa7.27□□□□□ -1.25
TMEM170A-202ENST00000561878 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
TMEM170A-202ENST00000561878 MT1AP04731 61 aa7.11□□□□□ -1.27
TMEM170A-202ENST00000561878 ROMO1P60602 79 aa7.1□□□□□ -1.27
TMEM170A-202ENST00000561878 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
TMEM170A-202ENST00000561878 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
TMEM170A-202ENST00000561878 KRTAP5-2Q701N4 177 aa7.01□□□□□ -1.29
TMEM170A-202ENST00000561878 KRTAP4-11Q9BYQ6 195 aa6.97□□□□□ -1.29
TMEM170A-202ENST00000561878 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
TMEM170A-202ENST00000561878 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
TMEM170A-202ENST00000561878 KRTAP6-2Q3LI66 62 aa6.77□□□□□ -1.33
TMEM170A-202ENST00000561878 KRTAP5-8O75690 187 aa6.73□□□□□ -1.33
TMEM170A-202ENST00000561878 PCP4P48539 62 aa6.68□□□□□ -1.34
TMEM170A-202ENST00000561878 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
TMEM170A-202ENST00000561878 MT3P25713 68 aa6.52□□□□□ -1.37
TMEM170A-202ENST00000561878 KRTAP9-9Q9BYP9 154 aa6.45□□□□□ -1.38
TMEM170A-202ENST00000561878 MUC5ACP98088 5654 aa6.44□□□□□ -1.38
TMEM170A-202ENST00000561878 MUC5BQ9HC84 5762 aaPredicted RBP6.42□□□□□ -1.38
TMEM170A-202ENST00000561878 AHNAKQ09666 5890 aaKnown RBP6.41□□□□□ -1.38
TMEM170A-202ENST00000561878 KRTAP5-1Q6L8H4 278 aa6.3□□□□□ -1.4
TMEM170A-202ENST00000561878 LCE1EQ5T753 118 aa6.02□□□□□ -1.45
TMEM170A-202ENST00000561878 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
TMEM170A-202ENST00000561878 SVIPQ8NHG7 77 aa5.95□□□□□ -1.46
TMEM170A-202ENST00000561878 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
TMEM170A-202ENST00000561878 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
TMEM170A-202ENST00000561878 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
TMEM170A-202ENST00000561878 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
TMEM170A-202ENST00000561878 LCE1CQ5T751 118 aa5.58□□□□□ -1.52
TMEM170A-202ENST00000561878 H3BS24 57 aa5.47□□□□□ -1.53
TMEM170A-202ENST00000561878 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
TMEM170A-202ENST00000561878 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
TMEM170A-202ENST00000561878 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
TMEM170A-202ENST00000561878 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
TMEM170A-202ENST00000561878 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
TMEM170A-202ENST00000561878 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
TMEM170A-202ENST00000561878 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
TMEM170A-202ENST00000561878 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
TMEM170A-202ENST00000561878 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
TMEM170A-202ENST00000561878 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
TMEM170A-202ENST00000561878 PHGR1C9JFL3 82 aa4.53□□□□□ -1.68
TMEM170A-202ENST00000561878 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
TMEM170A-202ENST00000561878 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
TMEM170A-202ENST00000561878 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
TMEM170A-202ENST00000561878 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
TMEM170A-202ENST00000561878 PRM1P04553 51 aa3.61□□□□□ -1.83
TMEM170A-202ENST00000561878 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
TMEM170A-202ENST00000561878 INE1O15225 51 aa3.17□□□□□ -1.9
TMEM170A-202ENST00000561878 MUC16Q8WXI7 14507 aa2.93□□□□□ -1.94
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms