RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
USP8-212ENST00000560730 UQCR11O14957 56 aa4.52□□□□□ -1.69
USP8-212ENST00000560730 MT1EP04732 61 aa4.49□□□□□ -1.69
USP8-212ENST00000560730 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.69
USP8-212ENST00000560730 PSPHP1O15172 72 aa4.45□□□□□ -1.7
USP8-212ENST00000560730 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
USP8-212ENST00000560730 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
USP8-212ENST00000560730 TNP1P09430 55 aa4.44□□□□□ -1.7
USP8-212ENST00000560730 MIR22HGQ0VDD5 57 aa4.44□□□□□ -1.7
USP8-212ENST00000560730 Q1T7F1 81 aa4.44□□□□□ -1.7
USP8-212ENST00000560730 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
USP8-212ENST00000560730 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
USP8-212ENST00000560730 V9GYY9 64 aa4.42□□□□□ -1.7
USP8-212ENST00000560730 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
USP8-212ENST00000560730 PCP4P48539 62 aa4.37□□□□□ -1.71
USP8-212ENST00000560730 MT1LQ93083 61 aa4.32□□□□□ -1.72
USP8-212ENST00000560730 MT1GP13640 62 aa4.31□□□□□ -1.72
USP8-212ENST00000560730 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
USP8-212ENST00000560730 K7ERS5 55 aa4.29□□□□□ -1.72
USP8-212ENST00000560730 A6NED7 52 aa4.27□□□□□ -1.73
USP8-212ENST00000560730 MT1MQ8N339 61 aa4.27□□□□□ -1.73
USP8-212ENST00000560730 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
USP8-212ENST00000560730 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
USP8-212ENST00000560730 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
USP8-212ENST00000560730 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
USP8-212ENST00000560730 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
USP8-212ENST00000560730 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
USP8-212ENST00000560730 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
USP8-212ENST00000560730 ROMO1P60602 79 aa4.05□□□□□ -1.76
USP8-212ENST00000560730 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
USP8-212ENST00000560730 MT4P47944 62 aa3.99□□□□□ -1.77
USP8-212ENST00000560730 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
USP8-212ENST00000560730 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.78
USP8-212ENST00000560730 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
USP8-212ENST00000560730 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
USP8-212ENST00000560730 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
USP8-212ENST00000560730 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
USP8-212ENST00000560730 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
USP8-212ENST00000560730 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
USP8-212ENST00000560730 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
USP8-212ENST00000560730 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
USP8-212ENST00000560730 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
USP8-212ENST00000560730 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
USP8-212ENST00000560730 MT1AP04731 61 aa3.67□□□□□ -1.82
USP8-212ENST00000560730 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
USP8-212ENST00000560730 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
USP8-212ENST00000560730 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
USP8-212ENST00000560730 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
USP8-212ENST00000560730 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
USP8-212ENST00000560730 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
USP8-212ENST00000560730 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
USP8-212ENST00000560730 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
USP8-212ENST00000560730 MT3P25713 68 aa3.48□□□□□ -1.85
USP8-212ENST00000560730 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
USP8-212ENST00000560730 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
USP8-212ENST00000560730 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
USP8-212ENST00000560730 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.88
USP8-212ENST00000560730 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
USP8-212ENST00000560730 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
USP8-212ENST00000560730 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
USP8-212ENST00000560730 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
USP8-212ENST00000560730 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
USP8-212ENST00000560730 MUC5ACP98088 5654 aa3□□□□□ -1.93
USP8-212ENST00000560730 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
USP8-212ENST00000560730 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
USP8-212ENST00000560730 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
USP8-212ENST00000560730 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
USP8-212ENST00000560730 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.96
USP8-212ENST00000560730 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
USP8-212ENST00000560730 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
USP8-212ENST00000560730 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
USP8-212ENST00000560730 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
USP8-212ENST00000560730 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
USP8-212ENST00000560730 PRM1P04553 51 aa2.09□□□□□ -2.07
USP8-212ENST00000560730 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
USP8-212ENST00000560730 INE1O15225 51 aa1.9□□□□□ -2.11
USP8-212ENST00000560730 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
USP8-212ENST00000560730 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 190.3 ms