RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
CRNDE-206ENST00000559432 V9GYY9 64 aa8.85□□□□□ -0.99
CRNDE-206ENST00000559432 Q1T7F1 81 aa8.83□□□□□ -1
CRNDE-206ENST00000559432 PSPHP1O15172 72 aa8.81□□□□□ -1
CRNDE-206ENST00000559432 LCE1DQ5T752 114 aa8.8□□□□□ -1
CRNDE-206ENST00000559432 LCE4AQ5TA78 99 aa8.8□□□□□ -1
CRNDE-206ENST00000559432 KRTAP4-3Q9BYR4 195 aa8.73□□□□□ -1.01
CRNDE-206ENST00000559432 MT4P47944 62 aa8.71□□□□□ -1.02
CRNDE-206ENST00000559432 K7ERS5 55 aa8.62□□□□□ -1.03
CRNDE-206ENST00000559432 KRTAP12-3P60328 96 aa8.62□□□□□ -1.03
CRNDE-206ENST00000559432 PCP4P48539 62 aa8.6□□□□□ -1.03
CRNDE-206ENST00000559432 HMCN1Q96RW7 5635 aa8.57□□□□□ -1.04
CRNDE-206ENST00000559432 KRTAP5-4Q6L8H1 288 aa8.57□□□□□ -1.04
CRNDE-206ENST00000559432 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
CRNDE-206ENST00000559432 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.05
CRNDE-206ENST00000559432 A6NED7 52 aa8.51□□□□□ -1.05
CRNDE-206ENST00000559432 KRTAP4-7Q9BYR0 210 aa8.49□□□□□ -1.05
CRNDE-206ENST00000559432 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
CRNDE-206ENST00000559432 AHNAK2Q8IVF2 5795 aa8.32□□□□□ -1.08
CRNDE-206ENST00000559432 KRTAP23-1A1A580 65 aa8.21□□□□□ -1.1
CRNDE-206ENST00000559432 KRTAP5-10Q6L8G5 202 aa8.21□□□□□ -1.1
CRNDE-206ENST00000559432 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
CRNDE-206ENST00000559432 KRTAP5-5Q701N2 237 aaPredicted RBP8.19□□□□□ -1.1
CRNDE-206ENST00000559432 KRTAP19-4Q3LI73 84 aa8.14□□□□□ -1.11
CRNDE-206ENST00000559432 KRTAP20-2Q3LI61 65 aa8.11□□□□□ -1.11
CRNDE-206ENST00000559432 ROMO1P60602 79 aa8.1□□□□□ -1.11
CRNDE-206ENST00000559432 SPRR5A0A1B0GTR4 108 aa8.08□□□□□ -1.12
CRNDE-206ENST00000559432 KRTAP12-4P60329 112 aa8.07□□□□□ -1.12
CRNDE-206ENST00000559432 LOC100996750A0A140TA64 210 aa8.06□□□□□ -1.12
CRNDE-206ENST00000559432 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
CRNDE-206ENST00000559432 KRTAP5-3Q6L8H2 238 aa8.02□□□□□ -1.13
CRNDE-206ENST00000559432 LCE3CQ5T5A8 94 aa7.93□□□□□ -1.14
CRNDE-206ENST00000559432 KRTAP5-7Q6L8G8 165 aa7.91□□□□□ -1.14
CRNDE-206ENST00000559432 SYNE1Q8NF91 8797 aaKnown RBP7.83□□□□□ -1.16
CRNDE-206ENST00000559432 MT1AP04731 61 aa7.63□□□□□ -1.19
CRNDE-206ENST00000559432 KRTAP6-1Q3LI64 71 aa7.57□□□□□ -1.2
CRNDE-206ENST00000559432 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
CRNDE-206ENST00000559432 KRTAP5-2Q701N4 177 aa7.48□□□□□ -1.21
CRNDE-206ENST00000559432 KRTAP9-6A8MVA2 160 aa7.43□□□□□ -1.22
CRNDE-206ENST00000559432 KRTAP4-11Q9BYQ6 195 aa7.43□□□□□ -1.22
CRNDE-206ENST00000559432 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
CRNDE-206ENST00000559432 KRTAP6-2Q3LI66 62 aa7.27□□□□□ -1.25
CRNDE-206ENST00000559432 KRTAP5-8O75690 187 aa7.17□□□□□ -1.26
CRNDE-206ENST00000559432 PMAIP1Q13794 54 aa7.07□□□□□ -1.28
CRNDE-206ENST00000559432 MT3P25713 68 aa7.01□□□□□ -1.29
CRNDE-206ENST00000559432 OBSCNQ5VST9 7968 aa7□□□□□ -1.29
CRNDE-206ENST00000559432 MUC5ACP98088 5654 aa6.89□□□□□ -1.31
CRNDE-206ENST00000559432 AHNAKQ09666 5890 aaKnown RBP6.88□□□□□ -1.31
CRNDE-206ENST00000559432 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
CRNDE-206ENST00000559432 MUC5BQ9HC84 5762 aaPredicted RBP6.81□□□□□ -1.32
CRNDE-206ENST00000559432 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
CRNDE-206ENST00000559432 KRTAP5-1Q6L8H4 278 aa6.72□□□□□ -1.33
CRNDE-206ENST00000559432 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
CRNDE-206ENST00000559432 LCE1EQ5T753 118 aa6.44□□□□□ -1.38
CRNDE-206ENST00000559432 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
CRNDE-206ENST00000559432 LCE1BQ5T7P3 118 aa6.1□□□□□ -1.43
CRNDE-206ENST00000559432 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
CRNDE-206ENST00000559432 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
CRNDE-206ENST00000559432 LCE1CQ5T751 118 aa5.97□□□□□ -1.45
CRNDE-206ENST00000559432 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
CRNDE-206ENST00000559432 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
CRNDE-206ENST00000559432 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
CRNDE-206ENST00000559432 KRTAP5-11Q6L8G4 156 aa5.41□□□□□ -1.54
CRNDE-206ENST00000559432 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.4□□□□□ -1.54
CRNDE-206ENST00000559432 LCE3EQ5T5B0 92 aa5.38□□□□□ -1.55
CRNDE-206ENST00000559432 LCE1FQ5T754 118 aa5.31□□□□□ -1.56
CRNDE-206ENST00000559432 H3BS24 57 aa5.18□□□□□ -1.58
CRNDE-206ENST00000559432 KRTAP21-2Q3LI59 83 aa4.98□□□□□ -1.61
CRNDE-206ENST00000559432 PHGR1C9JFL3 82 aa4.82□□□□□ -1.64
CRNDE-206ENST00000559432 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
CRNDE-206ENST00000559432 KRTAP4-4Q9BYR3 166 aa4.59□□□□□ -1.67
CRNDE-206ENST00000559432 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
CRNDE-206ENST00000559432 PRM1P04553 51 aa4.15□□□□□ -1.75
CRNDE-206ENST00000559432 INE1O15225 51 aa3.78□□□□□ -1.8
CRNDE-206ENST00000559432 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
CRNDE-206ENST00000559432 KRTAP21-1Q3LI58 79 aa3.67□□□□□ -1.82
CRNDE-206ENST00000559432 MUC16Q8WXI7 14507 aa3.1□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 682.8 ms