RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MT4P47944 62 aa6.14□□□□□ -1.43
TPM1-218ENST00000559281 UQCR11O14957 56 aa6.13□□□□□ -1.43
TPM1-218ENST00000559281 TMEM258P61165 79 aa6.13□□□□□ -1.43
TPM1-218ENST00000559281 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
TPM1-218ENST00000559281 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
TPM1-218ENST00000559281 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
TPM1-218ENST00000559281 HMCN1Q96RW7 5635 aa6.02□□□□□ -1.45
TPM1-218ENST00000559281 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
TPM1-218ENST00000559281 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
TPM1-218ENST00000559281 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
TPM1-218ENST00000559281 K7ERS5 55 aa5.94□□□□□ -1.46
TPM1-218ENST00000559281 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
TPM1-218ENST00000559281 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
TPM1-218ENST00000559281 V9GYY9 64 aa5.83□□□□□ -1.48
TPM1-218ENST00000559281 PSPHP1O15172 72 aa5.82□□□□□ -1.48
TPM1-218ENST00000559281 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
TPM1-218ENST00000559281 KRTAP5-10Q6L8G5 202 aa5.8□□□□□ -1.48
TPM1-218ENST00000559281 PCP4P48539 62 aa5.79□□□□□ -1.48
TPM1-218ENST00000559281 Q1T7F1 81 aa5.79□□□□□ -1.48
TPM1-218ENST00000559281 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
TPM1-218ENST00000559281 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
TPM1-218ENST00000559281 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
TPM1-218ENST00000559281 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
TPM1-218ENST00000559281 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
TPM1-218ENST00000559281 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
TPM1-218ENST00000559281 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TPM1-218ENST00000559281 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
TPM1-218ENST00000559281 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
TPM1-218ENST00000559281 A6NED7 52 aa5.59□□□□□ -1.51
TPM1-218ENST00000559281 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
TPM1-218ENST00000559281 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
TPM1-218ENST00000559281 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
TPM1-218ENST00000559281 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
TPM1-218ENST00000559281 ROMO1P60602 79 aa5.45□□□□□ -1.54
TPM1-218ENST00000559281 MT1AP04731 61 aa5.37□□□□□ -1.55
TPM1-218ENST00000559281 KRTAP6-1Q3LI64 71 aa5.32□□□□□ -1.56
TPM1-218ENST00000559281 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
TPM1-218ENST00000559281 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
TPM1-218ENST00000559281 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
TPM1-218ENST00000559281 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
TPM1-218ENST00000559281 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
TPM1-218ENST00000559281 KRTAP5-8O75690 187 aa5.06□□□□□ -1.6
TPM1-218ENST00000559281 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
TPM1-218ENST00000559281 MT3P25713 68 aa4.96□□□□□ -1.62
TPM1-218ENST00000559281 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
TPM1-218ENST00000559281 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
TPM1-218ENST00000559281 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
TPM1-218ENST00000559281 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
TPM1-218ENST00000559281 MUC5BQ9HC84 5762 aaPredicted RBP4.79□□□□□ -1.64
TPM1-218ENST00000559281 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
TPM1-218ENST00000559281 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
TPM1-218ENST00000559281 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
TPM1-218ENST00000559281 H3BS24 57 aa4.59□□□□□ -1.67
TPM1-218ENST00000559281 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
TPM1-218ENST00000559281 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
TPM1-218ENST00000559281 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
TPM1-218ENST00000559281 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
TPM1-218ENST00000559281 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
TPM1-218ENST00000559281 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
TPM1-218ENST00000559281 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
TPM1-218ENST00000559281 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
TPM1-218ENST00000559281 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TPM1-218ENST00000559281 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
TPM1-218ENST00000559281 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
TPM1-218ENST00000559281 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
TPM1-218ENST00000559281 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
TPM1-218ENST00000559281 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
TPM1-218ENST00000559281 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
TPM1-218ENST00000559281 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
TPM1-218ENST00000559281 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
TPM1-218ENST00000559281 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
TPM1-218ENST00000559281 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
TPM1-218ENST00000559281 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
TPM1-218ENST00000559281 INE1O15225 51 aa2.82□□□□□ -1.96
TPM1-218ENST00000559281 PRM1P04553 51 aa2.78□□□□□ -1.96
TPM1-218ENST00000559281 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
TPM1-218ENST00000559281 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 271.2 ms