RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
IRF9-204ENST00000559229 TNP1P09430 55 aa5.23□□□□□ -1.57
IRF9-204ENST00000559229 A8MU10 97 aa5.19□□□□□ -1.58
IRF9-204ENST00000559229 A0A1B0GU69 56 aa5.18□□□□□ -1.58
IRF9-204ENST00000559229 H7BZZ5 65 aa5.17□□□□□ -1.58
IRF9-204ENST00000559229 COX7CP15954 63 aa5.17□□□□□ -1.58
IRF9-204ENST00000559229 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
IRF9-204ENST00000559229 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
IRF9-204ENST00000559229 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
IRF9-204ENST00000559229 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
IRF9-204ENST00000559229 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
IRF9-204ENST00000559229 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
IRF9-204ENST00000559229 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
IRF9-204ENST00000559229 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
IRF9-204ENST00000559229 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
IRF9-204ENST00000559229 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
IRF9-204ENST00000559229 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
IRF9-204ENST00000559229 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
IRF9-204ENST00000559229 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
IRF9-204ENST00000559229 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
IRF9-204ENST00000559229 UQCR11O14957 56 aa4.79□□□□□ -1.64
IRF9-204ENST00000559229 ATP5EP56381 51 aaPredicted RBP4.79□□□□□ -1.64
IRF9-204ENST00000559229 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
IRF9-204ENST00000559229 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
IRF9-204ENST00000559229 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
IRF9-204ENST00000559229 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
IRF9-204ENST00000559229 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
IRF9-204ENST00000559229 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
IRF9-204ENST00000559229 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
IRF9-204ENST00000559229 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
IRF9-204ENST00000559229 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
IRF9-204ENST00000559229 K7ERS5 55 aa4.62□□□□□ -1.67
IRF9-204ENST00000559229 MT1AP04731 61 aa4.59□□□□□ -1.67
IRF9-204ENST00000559229 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
IRF9-204ENST00000559229 TMEM258P61165 79 aa4.55□□□□□ -1.68
IRF9-204ENST00000559229 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
IRF9-204ENST00000559229 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
IRF9-204ENST00000559229 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
IRF9-204ENST00000559229 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
IRF9-204ENST00000559229 PSPHP1O15172 72 aa4.4□□□□□ -1.71
IRF9-204ENST00000559229 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
IRF9-204ENST00000559229 V9GYY9 64 aa4.39□□□□□ -1.71
IRF9-204ENST00000559229 Q1T7F1 81 aa4.36□□□□□ -1.71
IRF9-204ENST00000559229 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
IRF9-204ENST00000559229 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
IRF9-204ENST00000559229 ROMO1P60602 79 aa4.25□□□□□ -1.73
IRF9-204ENST00000559229 A6NED7 52 aa4.24□□□□□ -1.73
IRF9-204ENST00000559229 MT3P25713 68 aa4.23□□□□□ -1.73
IRF9-204ENST00000559229 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
IRF9-204ENST00000559229 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
IRF9-204ENST00000559229 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
IRF9-204ENST00000559229 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
IRF9-204ENST00000559229 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
IRF9-204ENST00000559229 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
IRF9-204ENST00000559229 PCP4P48539 62 aa3.46□□□□□ -1.86
IRF9-204ENST00000559229 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
IRF9-204ENST00000559229 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
IRF9-204ENST00000559229 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
IRF9-204ENST00000559229 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
IRF9-204ENST00000559229 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
IRF9-204ENST00000559229 BRK1Q8WUW1 75 aa3.3□□□□□ -1.88
IRF9-204ENST00000559229 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
IRF9-204ENST00000559229 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
IRF9-204ENST00000559229 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
IRF9-204ENST00000559229 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
IRF9-204ENST00000559229 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
IRF9-204ENST00000559229 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
IRF9-204ENST00000559229 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
IRF9-204ENST00000559229 PRO0628Q9UI54 55 aa2.56□□□□□ -2
IRF9-204ENST00000559229 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
IRF9-204ENST00000559229 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
IRF9-204ENST00000559229 SVIPQ8NHG7 77 aa2.47□□□□□ -2.01
IRF9-204ENST00000559229 PRM1P04553 51 aa2.15□□□□□ -2.07
IRF9-204ENST00000559229 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
IRF9-204ENST00000559229 NDUFAF8A1L188 74 aa1.75□□□□□ -2.13
IRF9-204ENST00000559229 INE1O15225 51 aa1.35□□□□□ -2.19
IRF9-204ENST00000559229 A0A0A0MQY5 61 aa1.16□□□□□ -2.22
IRF9-204ENST00000559229 H3BS24 57 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms