RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 DNAH14Q0VDD8 3507 aa-1.48□□□□□ -2.65
CASC4-206ENST00000558847 DNAH12Q6ZR08 3092 aa-1.49□□□□□ -2.65
CASC4-206ENST00000558847 KRTAP19-2Q3LHN2 52 aa-1.49□□□□□ -2.65
CASC4-206ENST00000558847 ABCA9Q8IUA7 1624 aa-1.49□□□□□ -2.65
CASC4-206ENST00000558847 LMO7Q8WWI1 1683 aa-1.49□□□□□ -2.65
CASC4-206ENST00000558847 LINC01549A6NIU2 74 aa-1.5□□□□□ -2.65
CASC4-206ENST00000558847 UNC80Q8N2C7 3258 aa-1.51□□□□□ -2.65
CASC4-206ENST00000558847 IGIPA6NJ69 53 aa-1.51□□□□□ -2.65
CASC4-206ENST00000558847 HTN1P15515 57 aa-1.52□□□□□ -2.65
CASC4-206ENST00000558847 SYCP2Q9BX26 1530 aa-1.52□□□□□ -2.65
CASC4-206ENST00000558847 UGGT1Q9NYU2 1555 aa-1.52□□□□□ -2.65
CASC4-206ENST00000558847 LINC01590Q5TEZ4 76 aa-1.53□□□□□ -2.65
CASC4-206ENST00000558847 AGLP35573 1532 aa-1.54□□□□□ -2.66
CASC4-206ENST00000558847 ABCA6Q8N139 1617 aa-1.55□□□□□ -2.66
CASC4-206ENST00000558847 LOC400499M0QZD8 3231 aa-1.55□□□□□ -2.66
CASC4-206ENST00000558847 TFF3Q07654 80 aa-1.55□□□□□ -2.66
CASC4-206ENST00000558847 USP34Q70CQ2 3546 aa-1.55□□□□□ -2.66
CASC4-206ENST00000558847 PLNP26678 52 aa-1.56□□□□□ -2.66
CASC4-206ENST00000558847 TRPM2O94759 1503 aa-1.57□□□□□ -2.66
CASC4-206ENST00000558847 A0A096LNI7 61 aa-1.58□□□□□ -2.66
CASC4-206ENST00000558847 TOMM7Q9P0U1 55 aa-1.58□□□□□ -2.66
CASC4-206ENST00000558847 CENPFP49454 3210 aa-1.59□□□□□ -2.66
CASC4-206ENST00000558847 XIRP2A4UGR9 3374 aa-1.59□□□□□ -2.66
CASC4-206ENST00000558847 VCANP13611 3396 aa-1.59□□□□□ -2.66
CASC4-206ENST00000558847 CLTCL1P53675 1640 aa-1.6□□□□□ -2.67
CASC4-206ENST00000558847 DDX60Q8IY21 1712 aaKnown RBP-1.61□□□□□ -2.67
CASC4-206ENST00000558847 DEFB124Q8NES8 71 aa-1.62□□□□□ -2.67
CASC4-206ENST00000558847 ASPMQ8IZT6 3477 aa-1.62□□□□□ -2.67
CASC4-206ENST00000558847 CDH23Q9H251 3354 aa-1.64□□□□□ -2.67
CASC4-206ENST00000558847 CPS1P31327 1500 aa-1.64□□□□□ -2.67
CASC4-206ENST00000558847 ABCA5Q8WWZ7 1642 aa-1.64□□□□□ -2.67
CASC4-206ENST00000558847 PRXQ9BXM0 1461 aa-1.64□□□□□ -2.67
CASC4-206ENST00000558847 NDUFA1O15239 70 aa-1.65□□□□□ -2.67
CASC4-206ENST00000558847 BRCA2P51587 3418 aa-1.66□□□□□ -2.67
CASC4-206ENST00000558847 NFAT5O94916 1531 aa-1.67□□□□□ -2.68
CASC4-206ENST00000558847 EFCAB5A4FU69 1503 aa-1.68□□□□□ -2.68
CASC4-206ENST00000558847 ADCY10Q96PN6 1610 aa-1.69□□□□□ -2.68
CASC4-206ENST00000558847 LINC01556Q5JQF7 62 aa-1.69□□□□□ -2.68
CASC4-206ENST00000558847 VPS13AQ96RL7 3174 aa-1.69□□□□□ -2.68
CASC4-206ENST00000558847 ABCA10Q8WWZ4 1543 aa-1.71□□□□□ -2.68
CASC4-206ENST00000558847 DEFB104AQ8WTQ1 72 aa-1.71□□□□□ -2.68
CASC4-206ENST00000558847 CMC2Q9NRP2 79 aa-1.73□□□□□ -2.69
CASC4-206ENST00000558847 IQGAP1P46940 1657 aa-1.74□□□□□ -2.69
CASC4-206ENST00000558847 A0A087WWC5 75 aa-1.74□□□□□ -2.69
CASC4-206ENST00000558847 SMIM5Q71RC9 77 aa-1.74□□□□□ -2.69
CASC4-206ENST00000558847 DUOX1Q9NRD9 1551 aa-1.75□□□□□ -2.69
CASC4-206ENST00000558847 H3BUX3 64 aa-1.76□□□□□ -2.69
CASC4-206ENST00000558847 FANCD2Q9BXW9 1451 aa-1.76□□□□□ -2.69
CASC4-206ENST00000558847 TOP2AP11388 1531 aaKnown RBP-1.77□□□□□ -2.69
CASC4-206ENST00000558847 ABCC8Q09428 1581 aa-1.77□□□□□ -2.69
CASC4-206ENST00000558847 ERICH3Q5RHP9 1530 aa-1.78□□□□□ -2.69
CASC4-206ENST00000558847 SAMD9LQ8IVG5 1584 aa-1.79□□□□□ -2.7
CASC4-206ENST00000558847 RPL39P62891 51 aaKnown RBP-1.79□□□□□ -2.7
CASC4-206ENST00000558847 ATP7AQ04656 1500 aa-1.83□□□□□ -2.7
CASC4-206ENST00000558847 RPL39LQ96EH5 51 aaKnown RBP-1.85□□□□□ -2.71
CASC4-206ENST00000558847 UTRNP46939 3433 aa-1.86□□□□□ -2.71
CASC4-206ENST00000558847 MROH2BQ7Z745 1585 aa-1.88□□□□□ -2.71
CASC4-206ENST00000558847 APELAP0DMC3 54 aa-1.89□□□□□ -2.71
CASC4-206ENST00000558847 A0A096LPF7 62 aa-1.91□□□□□ -2.72
CASC4-206ENST00000558847 K7EIM0 57 aa-1.94□□□□□ -2.72
CASC4-206ENST00000558847 HTN3P15516 51 aa-1.96□□□□□ -2.72
CASC4-206ENST00000558847 PRCDQ00LT1 54 aa-1.97□□□□□ -2.72
CASC4-206ENST00000558847 TMEM167AQ8TBQ9 72 aa-1.99□□□□□ -2.73
CASC4-206ENST00000558847 SNRPGP15A8MWD9 76 aa-2□□□□□ -2.73
CASC4-206ENST00000558847 ARHGAP5-AS1Q96IT6 56 aa-2□□□□□ -2.73
CASC4-206ENST00000558847 Q9Y3F1 56 aa-2.01□□□□□ -2.73
CASC4-206ENST00000558847 GOLGB1Q14789 3259 aaKnown RBP-2.05□□□□□ -2.74
CASC4-206ENST00000558847 IQGAP2Q13576 1575 aa-2.07□□□□□ -2.74
CASC4-206ENST00000558847 SMIM31A0A1B0GVY4 71 aa-2.08□□□□□ -2.74
CASC4-206ENST00000558847 TOMM5Q8N4H5 51 aa-2.08□□□□□ -2.74
CASC4-206ENST00000558847 H3BSH0 61 aa-2.1□□□□□ -2.75
CASC4-206ENST00000558847 COX14Q96I36 57 aa-2.14□□□□□ -2.75
CASC4-206ENST00000558847 SNRPGP62308 76 aaKnown RBP-2.15□□□□□ -2.75
CASC4-206ENST00000558847 RPL39P5Q59GN2 51 aa-2.21□□□□□ -2.76
CASC4-206ENST00000558847 DEFB108AA8MXU0 73 aa-2.22□□□□□ -2.76
CASC4-206ENST00000558847 GCC2Q8IWJ2 1684 aa-2.3□□□□□ -2.78
CASC4-206ENST00000558847 DEFB108BQ8NET1 73 aa-2.32□□□□□ -2.78
CASC4-206ENST00000558847 STATHP02808 62 aa-2.43□□□□□ -2.8
Retrieved 78 of 20,778 RNA–protein pairs in 79 ms