RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
TSPAN3-204ENST00000558394 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
TSPAN3-204ENST00000558394 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
TSPAN3-204ENST00000558394 COX7CP15954 63 aa5.87□□□□□ -1.47
TSPAN3-204ENST00000558394 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
TSPAN3-204ENST00000558394 TNP1P09430 55 aa5.84□□□□□ -1.47
TSPAN3-204ENST00000558394 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
TSPAN3-204ENST00000558394 H7BZZ5 65 aa5.83□□□□□ -1.48
TSPAN3-204ENST00000558394 A0A1B0GU69 56 aa5.81□□□□□ -1.48
TSPAN3-204ENST00000558394 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
TSPAN3-204ENST00000558394 A8MU10 97 aa5.78□□□□□ -1.48
TSPAN3-204ENST00000558394 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
TSPAN3-204ENST00000558394 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
TSPAN3-204ENST00000558394 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
TSPAN3-204ENST00000558394 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
TSPAN3-204ENST00000558394 MUC5ACP98088 5654 aa5.59□□□□□ -1.51
TSPAN3-204ENST00000558394 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
TSPAN3-204ENST00000558394 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
TSPAN3-204ENST00000558394 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
TSPAN3-204ENST00000558394 MUC5BQ9HC84 5762 aaPredicted RBP5.54□□□□□ -1.52
TSPAN3-204ENST00000558394 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
TSPAN3-204ENST00000558394 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
TSPAN3-204ENST00000558394 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
TSPAN3-204ENST00000558394 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
TSPAN3-204ENST00000558394 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
TSPAN3-204ENST00000558394 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
TSPAN3-204ENST00000558394 UQCR11O14957 56 aa5.37□□□□□ -1.55
TSPAN3-204ENST00000558394 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
TSPAN3-204ENST00000558394 MT1AP04731 61 aa5.32□□□□□ -1.56
TSPAN3-204ENST00000558394 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
TSPAN3-204ENST00000558394 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
TSPAN3-204ENST00000558394 TMEM258P61165 79 aa5.25□□□□□ -1.57
TSPAN3-204ENST00000558394 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
TSPAN3-204ENST00000558394 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
TSPAN3-204ENST00000558394 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
TSPAN3-204ENST00000558394 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
TSPAN3-204ENST00000558394 K7ERS5 55 aa5.19□□□□□ -1.58
TSPAN3-204ENST00000558394 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
TSPAN3-204ENST00000558394 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
TSPAN3-204ENST00000558394 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
TSPAN3-204ENST00000558394 PSPHP1O15172 72 aa5.03□□□□□ -1.6
TSPAN3-204ENST00000558394 V9GYY9 64 aa5□□□□□ -1.61
TSPAN3-204ENST00000558394 Q1T7F1 81 aa4.94□□□□□ -1.62
TSPAN3-204ENST00000558394 MT3P25713 68 aa4.93□□□□□ -1.62
TSPAN3-204ENST00000558394 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
TSPAN3-204ENST00000558394 A6NED7 52 aa4.86□□□□□ -1.63
TSPAN3-204ENST00000558394 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
TSPAN3-204ENST00000558394 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
TSPAN3-204ENST00000558394 ROMO1P60602 79 aa4.79□□□□□ -1.64
TSPAN3-204ENST00000558394 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
TSPAN3-204ENST00000558394 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
TSPAN3-204ENST00000558394 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
TSPAN3-204ENST00000558394 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
TSPAN3-204ENST00000558394 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
TSPAN3-204ENST00000558394 PCP4P48539 62 aa4.16□□□□□ -1.74
TSPAN3-204ENST00000558394 LCE1FQ5T754 118 aa4□□□□□ -1.77
TSPAN3-204ENST00000558394 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
TSPAN3-204ENST00000558394 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
TSPAN3-204ENST00000558394 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
TSPAN3-204ENST00000558394 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
TSPAN3-204ENST00000558394 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
TSPAN3-204ENST00000558394 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
TSPAN3-204ENST00000558394 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
TSPAN3-204ENST00000558394 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
TSPAN3-204ENST00000558394 H3BS24 57 aa3.37□□□□□ -1.87
TSPAN3-204ENST00000558394 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
TSPAN3-204ENST00000558394 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
TSPAN3-204ENST00000558394 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TSPAN3-204ENST00000558394 SVIPQ8NHG7 77 aa3.27□□□□□ -1.89
TSPAN3-204ENST00000558394 PRO0628Q9UI54 55 aa3.13□□□□□ -1.91
TSPAN3-204ENST00000558394 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TSPAN3-204ENST00000558394 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
TSPAN3-204ENST00000558394 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
TSPAN3-204ENST00000558394 PRM1P04553 51 aa2.44□□□□□ -2.02
TSPAN3-204ENST00000558394 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
TSPAN3-204ENST00000558394 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
TSPAN3-204ENST00000558394 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
TSPAN3-204ENST00000558394 INE1O15225 51 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 48.9 ms