RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
USP3-207ENST00000558218 A0A1B0GU33 70 aa3.86□□□□□ -1.79
USP3-207ENST00000558218 H7BZZ5 65 aa3.86□□□□□ -1.79
USP3-207ENST00000558218 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
USP3-207ENST00000558218 A0A0D9SG42 100 aa3.81□□□□□ -1.8
USP3-207ENST00000558218 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
USP3-207ENST00000558218 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
USP3-207ENST00000558218 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
USP3-207ENST00000558218 CYSTM1Q9H1C7 97 aa3.79□□□□□ -1.8
USP3-207ENST00000558218 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
USP3-207ENST00000558218 A0A1B0GU69 56 aa3.78□□□□□ -1.8
USP3-207ENST00000558218 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
USP3-207ENST00000558218 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
USP3-207ENST00000558218 MT1EP04732 61 aa3.75□□□□□ -1.81
USP3-207ENST00000558218 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
USP3-207ENST00000558218 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
USP3-207ENST00000558218 MT1GP13640 62 aa3.7□□□□□ -1.82
USP3-207ENST00000558218 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
USP3-207ENST00000558218 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
USP3-207ENST00000558218 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
USP3-207ENST00000558218 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
USP3-207ENST00000558218 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
USP3-207ENST00000558218 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
USP3-207ENST00000558218 A8MU10 97 aa3.65□□□□□ -1.83
USP3-207ENST00000558218 TNP1P09430 55 aa3.65□□□□□ -1.83
USP3-207ENST00000558218 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
USP3-207ENST00000558218 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
USP3-207ENST00000558218 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
USP3-207ENST00000558218 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
USP3-207ENST00000558218 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
USP3-207ENST00000558218 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
USP3-207ENST00000558218 MT1LQ93083 61 aa3.59□□□□□ -1.83
USP3-207ENST00000558218 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
USP3-207ENST00000558218 MT1MQ8N339 61 aa3.57□□□□□ -1.84
USP3-207ENST00000558218 TMEM258P61165 79 aa3.56□□□□□ -1.84
USP3-207ENST00000558218 UQCR11O14957 56 aa3.55□□□□□ -1.84
USP3-207ENST00000558218 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
USP3-207ENST00000558218 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
USP3-207ENST00000558218 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
USP3-207ENST00000558218 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
USP3-207ENST00000558218 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
USP3-207ENST00000558218 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
USP3-207ENST00000558218 K7ERS5 55 aa3.43□□□□□ -1.86
USP3-207ENST00000558218 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
USP3-207ENST00000558218 V9GYY9 64 aa3.43□□□□□ -1.86
USP3-207ENST00000558218 MT4P47944 62 aa3.42□□□□□ -1.86
USP3-207ENST00000558218 Q1T7F1 81 aa3.37□□□□□ -1.87
USP3-207ENST00000558218 PSPHP1O15172 72 aa3.32□□□□□ -1.88
USP3-207ENST00000558218 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
USP3-207ENST00000558218 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
USP3-207ENST00000558218 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
USP3-207ENST00000558218 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
USP3-207ENST00000558218 A6NED7 52 aa3.23□□□□□ -1.89
USP3-207ENST00000558218 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
USP3-207ENST00000558218 RPS28P62857 69 aaKnown RBP3.2□□□□□ -1.9
USP3-207ENST00000558218 ROMO1P60602 79 aa3.16□□□□□ -1.9
USP3-207ENST00000558218 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
USP3-207ENST00000558218 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
USP3-207ENST00000558218 MT1AP04731 61 aa3.07□□□□□ -1.92
USP3-207ENST00000558218 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
USP3-207ENST00000558218 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
USP3-207ENST00000558218 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
USP3-207ENST00000558218 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
USP3-207ENST00000558218 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
USP3-207ENST00000558218 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
USP3-207ENST00000558218 PMAIP1Q13794 54 aa2.87□□□□□ -1.95
USP3-207ENST00000558218 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
USP3-207ENST00000558218 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
USP3-207ENST00000558218 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
USP3-207ENST00000558218 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
USP3-207ENST00000558218 LUZP6Q538Z0 58 aa2.55□□□□□ -2
USP3-207ENST00000558218 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
USP3-207ENST00000558218 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
USP3-207ENST00000558218 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
USP3-207ENST00000558218 INE1O15225 51 aa1.96□□□□□ -2.1
USP3-207ENST00000558218 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
USP3-207ENST00000558218 PRM1P04553 51 aa1.57□□□□□ -2.16
USP3-207ENST00000558218 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 129.7 ms