RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TGP01266 2768 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 LAMA1P25391 3075 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 DNAH17Q9UFH2 4485 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 CENPEQ02224 2701 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
SPG11-206ENST00000558093 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
SPG11-206ENST00000558093 NIPBLQ6KC79 2804 aaeCLIP0.47□□□□□ -2.33
SPG11-206ENST00000558093 LPAP08519 4548 aa0.47□□□□□ -2.33
SPG11-206ENST00000558093 DNAH5Q8TE73 4624 aa0.47□□□□□ -2.33
SPG11-206ENST00000558093 HERC1Q15751 4861 aa0.47□□□□□ -2.33
SPG11-206ENST00000558093 PKHD1P08F94 4074 aa0.47□□□□□ -2.33
SPG11-206ENST00000558093 A0A096LPF7 62 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 SPRR2DP22532 72 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 DEFB124Q8NES8 71 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 DEFB108BQ8NET1 73 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 ABCA13Q86UQ4 5058 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 KIAA1109Q2LD37 5005 aa0.46□□□□□ -2.34
SPG11-206ENST00000558093 CMYA5Q8N3K9 4069 aa0.45□□□□□ -2.34
SPG11-206ENST00000558093 FSIP2Q5CZC0 6907 aa0.45□□□□□ -2.34
SPG11-206ENST00000558093 DYNC1H1Q14204 4646 aaKnown RBP0.44□□□□□ -2.34
SPG11-206ENST00000558093 SMR3BP02814 79 aaPredicted RBP0.44□□□□□ -2.34
SPG11-206ENST00000558093 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
SPG11-206ENST00000558093 MGAM2Q2M2H8 2515 aa0.44□□□□□ -2.34
SPG11-206ENST00000558093 MAP1AP78559 2803 aaPredicted RBP0.44□□□□□ -2.34
SPG11-206ENST00000558093 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 SPRR2BP35325 72 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 DEFB133Q30KQ1 61 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 KRTAP6-2Q3LI66 62 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 COX14Q96I36 57 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
SPG11-206ENST00000558093 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
SPG11-206ENST00000558093 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
SPG11-206ENST00000558093 NEBP20929 6669 aa0.42□□□□□ -2.34
SPG11-206ENST00000558093 GPR98Q8WXG9 6306 aa0.42□□□□□ -2.34
SPG11-206ENST00000558093 MT1AP04731 61 aa0.41□□□□□ -2.34
SPG11-206ENST00000558093 HMCN2Q8NDA2 5059 aa0.41□□□□□ -2.34
SPG11-206ENST00000558093 MACF1Q9UPN3 7388 aaKnown RBP0.41□□□□□ -2.34
SPG11-206ENST00000558093 RNF213Q63HN8 5207 aa0.4□□□□□ -2.35
SPG11-206ENST00000558093 MUC17Q685J3 4493 aa0.4□□□□□ -2.35
SPG11-206ENST00000558093 SSPOA2VEC9 5147 aa0.4□□□□□ -2.35
SPG11-206ENST00000558093 SPRR2AP35326 72 aa0.39□□□□□ -2.35
SPG11-206ENST00000558093 STAB2Q8WWQ8 2551 aa0.38□□□□□ -2.35
SPG11-206ENST00000558093 LINC01556Q5JQF7 62 aa0.38□□□□□ -2.35
SPG11-206ENST00000558093 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
SPG11-206ENST00000558093 STARD9Q9P2P6 4700 aa0.35□□□□□ -2.35
SPG11-206ENST00000558093 SPRR2EP22531 72 aa0.35□□□□□ -2.35
SPG11-206ENST00000558093 RPS29P62273 56 aaKnown RBP0.35□□□□□ -2.35
SPG11-206ENST00000558093 LRP2P98164 4655 aa0.34□□□□□ -2.35
SPG11-206ENST00000558093 USH2AO75445 5202 aa0.34□□□□□ -2.35
SPG11-206ENST00000558093 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SPG11-206ENST00000558093 Q9Y3F1 56 aa0.33□□□□□ -2.36
SPG11-206ENST00000558093 KMT2DO14686 5537 aa0.33□□□□□ -2.36
SPG11-206ENST00000558093 DSTQ03001 7570 aaKnown RBP0.32□□□□□ -2.36
SPG11-206ENST00000558093 HTN3P15516 51 aa0.32□□□□□ -2.36
SPG11-206ENST00000558093 CD52P31358 61 aa0.32□□□□□ -2.36
SPG11-206ENST00000558093 KRTAP20-1Q3LI63 56 aa0.32□□□□□ -2.36
SPG11-206ENST00000558093 DEFB4AO15263 64 aa0.3□□□□□ -2.36
SPG11-206ENST00000558093 MUC12Q9UKN1 5478 aa0.29□□□□□ -2.36
SPG11-206ENST00000558093 MDN1Q9NU22 5596 aa0.28□□□□□ -2.36
SPG11-206ENST00000558093 MT1EP04732 61 aa0.27□□□□□ -2.37
SPG11-206ENST00000558093 MT1HL1P0DM35 61 aa0.26□□□□□ -2.37
SPG11-206ENST00000558093 MT1HP80294 61 aa0.26□□□□□ -2.37
SPG11-206ENST00000558093 KRTAP19-2Q3LHN2 52 aa0.26□□□□□ -2.37
SPG11-206ENST00000558093 MT1LQ93083 61 aa0.25□□□□□ -2.37
SPG11-206ENST00000558093 KRTAP19-6Q3LI70 58 aa0.24□□□□□ -2.37
SPG11-206ENST00000558093 MT1XP80297 61 aa0.21□□□□□ -2.38
SPG11-206ENST00000558093 MT1GP13640 62 aa0.19□□□□□ -2.38
SPG11-206ENST00000558093 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
SPG11-206ENST00000558093 MT2AP02795 61 aa0.17□□□□□ -2.38
SPG11-206ENST00000558093 MT1FP04733 61 aa0.17□□□□□ -2.38
SPG11-206ENST00000558093 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
SPG11-206ENST00000558093 MT4P47944 62 aa0.16□□□□□ -2.38
SPG11-206ENST00000558093 KRTAP6-1Q3LI64 71 aa0.15□□□□□ -2.39
SPG11-206ENST00000558093 MT1BP07438 61 aa0.14□□□□□ -2.39
SPG11-206ENST00000558093 KRTAP19-7Q3SYF9 63 aa0.14□□□□□ -2.39
SPG11-206ENST00000558093 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
SPG11-206ENST00000558093 MT1MQ8N339 61 aa0.1□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 178.9 ms