RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
HNRNPC-230ENST00000557201 A0A1B0GU33 70 aa4.45□□□□□ -1.7
HNRNPC-230ENST00000557201 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
HNRNPC-230ENST00000557201 A8MU10 97 aa4.44□□□□□ -1.7
HNRNPC-230ENST00000557201 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
HNRNPC-230ENST00000557201 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
HNRNPC-230ENST00000557201 SPRR2DP22532 72 aa4.39□□□□□ -1.71
HNRNPC-230ENST00000557201 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
HNRNPC-230ENST00000557201 A0A0D9SG42 100 aa4.31□□□□□ -1.72
HNRNPC-230ENST00000557201 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
HNRNPC-230ENST00000557201 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
HNRNPC-230ENST00000557201 UQCR11O14957 56 aa4.28□□□□□ -1.72
HNRNPC-230ENST00000557201 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
HNRNPC-230ENST00000557201 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
HNRNPC-230ENST00000557201 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
HNRNPC-230ENST00000557201 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
HNRNPC-230ENST00000557201 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
HNRNPC-230ENST00000557201 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
HNRNPC-230ENST00000557201 ROMO1P60602 79 aa4.16□□□□□ -1.74
HNRNPC-230ENST00000557201 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
HNRNPC-230ENST00000557201 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
HNRNPC-230ENST00000557201 K7ERS5 55 aa4.07□□□□□ -1.76
HNRNPC-230ENST00000557201 MT3P25713 68 aa4.05□□□□□ -1.76
HNRNPC-230ENST00000557201 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
HNRNPC-230ENST00000557201 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
HNRNPC-230ENST00000557201 MT1EP04732 61 aa4.02□□□□□ -1.77
HNRNPC-230ENST00000557201 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
HNRNPC-230ENST00000557201 TNP1P09430 55 aa4□□□□□ -1.77
HNRNPC-230ENST00000557201 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
HNRNPC-230ENST00000557201 MT1GP13640 62 aa3.89□□□□□ -1.79
HNRNPC-230ENST00000557201 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
HNRNPC-230ENST00000557201 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
HNRNPC-230ENST00000557201 MT4P47944 62 aa3.85□□□□□ -1.79
HNRNPC-230ENST00000557201 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
HNRNPC-230ENST00000557201 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
HNRNPC-230ENST00000557201 MT1MQ8N339 61 aa3.83□□□□□ -1.8
HNRNPC-230ENST00000557201 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
HNRNPC-230ENST00000557201 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
HNRNPC-230ENST00000557201 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
HNRNPC-230ENST00000557201 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
HNRNPC-230ENST00000557201 MT1LQ93083 61 aa3.79□□□□□ -1.8
HNRNPC-230ENST00000557201 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
HNRNPC-230ENST00000557201 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
HNRNPC-230ENST00000557201 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
HNRNPC-230ENST00000557201 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
HNRNPC-230ENST00000557201 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
HNRNPC-230ENST00000557201 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
HNRNPC-230ENST00000557201 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
HNRNPC-230ENST00000557201 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
HNRNPC-230ENST00000557201 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
HNRNPC-230ENST00000557201 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
HNRNPC-230ENST00000557201 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
HNRNPC-230ENST00000557201 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
HNRNPC-230ENST00000557201 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
HNRNPC-230ENST00000557201 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
HNRNPC-230ENST00000557201 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
HNRNPC-230ENST00000557201 INE1O15225 51 aa3.29□□□□□ -1.88
HNRNPC-230ENST00000557201 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
HNRNPC-230ENST00000557201 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
HNRNPC-230ENST00000557201 MT1AP04731 61 aa3.22□□□□□ -1.89
HNRNPC-230ENST00000557201 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
HNRNPC-230ENST00000557201 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
HNRNPC-230ENST00000557201 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HNRNPC-230ENST00000557201 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
HNRNPC-230ENST00000557201 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
HNRNPC-230ENST00000557201 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
HNRNPC-230ENST00000557201 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
HNRNPC-230ENST00000557201 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.92
HNRNPC-230ENST00000557201 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
HNRNPC-230ENST00000557201 LCE1CQ5T751 118 aa2.58□□□□□ -2
HNRNPC-230ENST00000557201 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
HNRNPC-230ENST00000557201 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
HNRNPC-230ENST00000557201 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
HNRNPC-230ENST00000557201 PRM1P04553 51 aa2.01□□□□□ -2.09
HNRNPC-230ENST00000557201 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
HNRNPC-230ENST00000557201 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
HNRNPC-230ENST00000557201 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 236.6 ms