RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
PSEN1-220ENST00000557037 MT1AP04731 61 aa3.67□□□□□ -1.82
PSEN1-220ENST00000557037 ACYP2P14621 99 aa3.64□□□□□ -1.83
PSEN1-220ENST00000557037 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
PSEN1-220ENST00000557037 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PSEN1-220ENST00000557037 TNP1P09430 55 aa3.62□□□□□ -1.83
PSEN1-220ENST00000557037 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
PSEN1-220ENST00000557037 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
PSEN1-220ENST00000557037 KRTAP12-1P59990 96 aa3.6□□□□□ -1.83
PSEN1-220ENST00000557037 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
PSEN1-220ENST00000557037 H3BPC8 53 aa3.54□□□□□ -1.84
PSEN1-220ENST00000557037 ATP5EP2Q5VTU8 51 aa3.53□□□□□ -1.84
PSEN1-220ENST00000557037 ETDBQ3ZM63 59 aa3.46□□□□□ -1.86
PSEN1-220ENST00000557037 SCGB1A1P11684 91 aa3.36□□□□□ -1.87
PSEN1-220ENST00000557037 A0A1B0GU33 70 aa3.35□□□□□ -1.87
PSEN1-220ENST00000557037 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
PSEN1-220ENST00000557037 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
PSEN1-220ENST00000557037 SERP1Q9Y6X1 66 aa3.33□□□□□ -1.88
PSEN1-220ENST00000557037 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PSEN1-220ENST00000557037 A8MU10 97 aa3.3□□□□□ -1.88
PSEN1-220ENST00000557037 F8W1H4 67 aa3.3□□□□□ -1.88
PSEN1-220ENST00000557037 SEC61GP60059 68 aa3.3□□□□□ -1.88
PSEN1-220ENST00000557037 FAM240AA0A1B0GVK7 77 aa3.29□□□□□ -1.88
PSEN1-220ENST00000557037 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PSEN1-220ENST00000557037 LINC00643Q86TS7 51 aa3.28□□□□□ -1.88
PSEN1-220ENST00000557037 SMIM26A0A096LP01 95 aa3.23□□□□□ -1.89
PSEN1-220ENST00000557037 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
PSEN1-220ENST00000557037 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
PSEN1-220ENST00000557037 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
PSEN1-220ENST00000557037 SMIM6P0DI80 62 aa3.21□□□□□ -1.9
PSEN1-220ENST00000557037 COL5A1-AS1Q5SY13 56 aa3.19□□□□□ -1.9
PSEN1-220ENST00000557037 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
PSEN1-220ENST00000557037 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
PSEN1-220ENST00000557037 COA5Q86WW8 74 aa3.09□□□□□ -1.91
PSEN1-220ENST00000557037 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
PSEN1-220ENST00000557037 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PSEN1-220ENST00000557037 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
PSEN1-220ENST00000557037 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
PSEN1-220ENST00000557037 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
PSEN1-220ENST00000557037 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
PSEN1-220ENST00000557037 A0A1B0GU69 56 aa2.93□□□□□ -1.94
PSEN1-220ENST00000557037 SMIM20Q8N5G0 67 aa2.9□□□□□ -1.95
PSEN1-220ENST00000557037 H7BZZ5 65 aa2.83□□□□□ -1.96
PSEN1-220ENST00000557037 V9GYY9 64 aa2.83□□□□□ -1.96
PSEN1-220ENST00000557037 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
PSEN1-220ENST00000557037 PRR15LQ9BU68 103 aa2.76□□□□□ -1.97
PSEN1-220ENST00000557037 LOC105371267A0A1B0GV96 52 aa2.69□□□□□ -1.98
PSEN1-220ENST00000557037 J3QR89 54 aa2.6□□□□□ -1.99
PSEN1-220ENST00000557037 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
PSEN1-220ENST00000557037 PSPHP1O15172 72 aa2.55□□□□□ -2
PSEN1-220ENST00000557037 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
PSEN1-220ENST00000557037 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
PSEN1-220ENST00000557037 UQCR11O14957 56 aa2.48□□□□□ -2.01
PSEN1-220ENST00000557037 K7ERS5 55 aa2.47□□□□□ -2.01
PSEN1-220ENST00000557037 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
PSEN1-220ENST00000557037 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PSEN1-220ENST00000557037 PMAIP1Q13794 54 aa2.43□□□□□ -2.02
PSEN1-220ENST00000557037 ANAPC13Q9BS18 74 aa2.42□□□□□ -2.02
PSEN1-220ENST00000557037 A0A1B0GV90 55 aa2.39□□□□□ -2.03
PSEN1-220ENST00000557037 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
PSEN1-220ENST00000557037 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
PSEN1-220ENST00000557037 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
PSEN1-220ENST00000557037 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PSEN1-220ENST00000557037 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
PSEN1-220ENST00000557037 COX7CP15954 63 aa2.27□□□□□ -2.05
PSEN1-220ENST00000557037 CDC42SE1Q9NRR8 79 aa2.24□□□□□ -2.05
PSEN1-220ENST00000557037 A6NED7 52 aa2.2□□□□□ -2.06
PSEN1-220ENST00000557037 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
PSEN1-220ENST00000557037 ROMO1P60602 79 aa2.17□□□□□ -2.06
PSEN1-220ENST00000557037 Q1T7F1 81 aa2.14□□□□□ -2.07
PSEN1-220ENST00000557037 K7ERU9 68 aa2.13□□□□□ -2.07
PSEN1-220ENST00000557037 BRK1Q8WUW1 75 aa2.04□□□□□ -2.08
PSEN1-220ENST00000557037 ATP5EP56381 51 aaPredicted RBP1.95□□□□□ -2.1
PSEN1-220ENST00000557037 CCDC179H3BU77 68 aa1.9□□□□□ -2.11
PSEN1-220ENST00000557037 TMEM258P61165 79 aa1.9□□□□□ -2.11
PSEN1-220ENST00000557037 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
PSEN1-220ENST00000557037 INE1O15225 51 aa1.65□□□□□ -2.15
PSEN1-220ENST00000557037 PRM1P04553 51 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 1573.4 ms