RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
SNX6-208ENST00000556712 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
SNX6-208ENST00000556712 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SNX6-208ENST00000556712 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
SNX6-208ENST00000556712 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
SNX6-208ENST00000556712 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
SNX6-208ENST00000556712 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
SNX6-208ENST00000556712 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
SNX6-208ENST00000556712 UQCR11O14957 56 aa3.77□□□□□ -1.81
SNX6-208ENST00000556712 TNP1P09430 55 aa3.76□□□□□ -1.81
SNX6-208ENST00000556712 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
SNX6-208ENST00000556712 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
SNX6-208ENST00000556712 MT1LQ93083 61 aa3.71□□□□□ -1.82
SNX6-208ENST00000556712 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SNX6-208ENST00000556712 MT1GP13640 62 aa3.69□□□□□ -1.82
SNX6-208ENST00000556712 MT1MQ8N339 61 aa3.68□□□□□ -1.82
SNX6-208ENST00000556712 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
SNX6-208ENST00000556712 Q1T7F1 81 aa3.65□□□□□ -1.83
SNX6-208ENST00000556712 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SNX6-208ENST00000556712 V9GYY9 64 aa3.64□□□□□ -1.83
SNX6-208ENST00000556712 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SNX6-208ENST00000556712 K7ERS5 55 aa3.59□□□□□ -1.83
SNX6-208ENST00000556712 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
SNX6-208ENST00000556712 A6NED7 52 aa3.56□□□□□ -1.84
SNX6-208ENST00000556712 PCP4P48539 62 aa3.53□□□□□ -1.84
SNX6-208ENST00000556712 MT4P47944 62 aa3.5□□□□□ -1.85
SNX6-208ENST00000556712 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
SNX6-208ENST00000556712 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
SNX6-208ENST00000556712 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
SNX6-208ENST00000556712 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
SNX6-208ENST00000556712 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
SNX6-208ENST00000556712 ROMO1P60602 79 aa3.39□□□□□ -1.87
SNX6-208ENST00000556712 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SNX6-208ENST00000556712 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
SNX6-208ENST00000556712 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
SNX6-208ENST00000556712 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SNX6-208ENST00000556712 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
SNX6-208ENST00000556712 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
SNX6-208ENST00000556712 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
SNX6-208ENST00000556712 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SNX6-208ENST00000556712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
SNX6-208ENST00000556712 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
SNX6-208ENST00000556712 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
SNX6-208ENST00000556712 MT1AP04731 61 aa3.15□□□□□ -1.91
SNX6-208ENST00000556712 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
SNX6-208ENST00000556712 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
SNX6-208ENST00000556712 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
SNX6-208ENST00000556712 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SNX6-208ENST00000556712 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SNX6-208ENST00000556712 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
SNX6-208ENST00000556712 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SNX6-208ENST00000556712 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
SNX6-208ENST00000556712 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
SNX6-208ENST00000556712 MT3P25713 68 aa2.85□□□□□ -1.95
SNX6-208ENST00000556712 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SNX6-208ENST00000556712 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SNX6-208ENST00000556712 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SNX6-208ENST00000556712 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
SNX6-208ENST00000556712 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
SNX6-208ENST00000556712 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SNX6-208ENST00000556712 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
SNX6-208ENST00000556712 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
SNX6-208ENST00000556712 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
SNX6-208ENST00000556712 A0A0A0MQY5 61 aa2.54□□□□□ -2
SNX6-208ENST00000556712 SVIPQ8NHG7 77 aa2.53□□□□□ -2
SNX6-208ENST00000556712 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SNX6-208ENST00000556712 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SNX6-208ENST00000556712 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
SNX6-208ENST00000556712 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SNX6-208ENST00000556712 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
SNX6-208ENST00000556712 NDUFAF8A1L188 74 aa2.07□□□□□ -2.08
SNX6-208ENST00000556712 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SNX6-208ENST00000556712 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
SNX6-208ENST00000556712 PRM1P04553 51 aa1.77□□□□□ -2.13
SNX6-208ENST00000556712 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SNX6-208ENST00000556712 INE1O15225 51 aa1.49□□□□□ -2.17
SNX6-208ENST00000556712 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
SNX6-208ENST00000556712 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 122.3 ms