RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
ACTN1-221ENST00000556571 UQCR11O14957 56 aa4.28□□□□□ -1.72
ACTN1-221ENST00000556571 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
ACTN1-221ENST00000556571 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
ACTN1-221ENST00000556571 MT1MQ8N339 61 aa4.25□□□□□ -1.73
ACTN1-221ENST00000556571 V9GYY9 64 aa4.24□□□□□ -1.73
ACTN1-221ENST00000556571 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
ACTN1-221ENST00000556571 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
ACTN1-221ENST00000556571 TNP1P09430 55 aa4.19□□□□□ -1.74
ACTN1-221ENST00000556571 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
ACTN1-221ENST00000556571 MT1LQ93083 61 aa4.19□□□□□ -1.74
ACTN1-221ENST00000556571 PSPHP1O15172 72 aa4.17□□□□□ -1.74
ACTN1-221ENST00000556571 K7ERS5 55 aa4.16□□□□□ -1.74
ACTN1-221ENST00000556571 Q1T7F1 81 aa4.16□□□□□ -1.74
ACTN1-221ENST00000556571 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
ACTN1-221ENST00000556571 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
ACTN1-221ENST00000556571 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
ACTN1-221ENST00000556571 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
ACTN1-221ENST00000556571 A6NED7 52 aa4.07□□□□□ -1.76
ACTN1-221ENST00000556571 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
ACTN1-221ENST00000556571 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
ACTN1-221ENST00000556571 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
ACTN1-221ENST00000556571 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
ACTN1-221ENST00000556571 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
ACTN1-221ENST00000556571 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
ACTN1-221ENST00000556571 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
ACTN1-221ENST00000556571 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
ACTN1-221ENST00000556571 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
ACTN1-221ENST00000556571 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
ACTN1-221ENST00000556571 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
ACTN1-221ENST00000556571 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
ACTN1-221ENST00000556571 ROMO1P60602 79 aa3.83□□□□□ -1.8
ACTN1-221ENST00000556571 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
ACTN1-221ENST00000556571 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
ACTN1-221ENST00000556571 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
ACTN1-221ENST00000556571 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
ACTN1-221ENST00000556571 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
ACTN1-221ENST00000556571 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
ACTN1-221ENST00000556571 MUC5ACP98088 5654 aa3.71□□□□□ -1.81
ACTN1-221ENST00000556571 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
ACTN1-221ENST00000556571 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
ACTN1-221ENST00000556571 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
ACTN1-221ENST00000556571 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
ACTN1-221ENST00000556571 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
ACTN1-221ENST00000556571 MT1AP04731 61 aa3.56□□□□□ -1.84
ACTN1-221ENST00000556571 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
ACTN1-221ENST00000556571 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
ACTN1-221ENST00000556571 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
ACTN1-221ENST00000556571 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
ACTN1-221ENST00000556571 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
ACTN1-221ENST00000556571 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
ACTN1-221ENST00000556571 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
ACTN1-221ENST00000556571 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
ACTN1-221ENST00000556571 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
ACTN1-221ENST00000556571 MT3P25713 68 aa3.29□□□□□ -1.88
ACTN1-221ENST00000556571 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
ACTN1-221ENST00000556571 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
ACTN1-221ENST00000556571 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
ACTN1-221ENST00000556571 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
ACTN1-221ENST00000556571 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
ACTN1-221ENST00000556571 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
ACTN1-221ENST00000556571 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
ACTN1-221ENST00000556571 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
ACTN1-221ENST00000556571 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
ACTN1-221ENST00000556571 H3BS24 57 aa2.65□□□□□ -1.99
ACTN1-221ENST00000556571 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
ACTN1-221ENST00000556571 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
ACTN1-221ENST00000556571 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
ACTN1-221ENST00000556571 PHGR1C9JFL3 82 aa2.54□□□□□ -2
ACTN1-221ENST00000556571 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
ACTN1-221ENST00000556571 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
ACTN1-221ENST00000556571 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
ACTN1-221ENST00000556571 INE1O15225 51 aa2.27□□□□□ -2.05
ACTN1-221ENST00000556571 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
ACTN1-221ENST00000556571 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
ACTN1-221ENST00000556571 PRM1P04553 51 aa1.95□□□□□ -2.1
ACTN1-221ENST00000556571 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
ACTN1-221ENST00000556571 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 75.5 ms