RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ATP5EP56381 51 aaPredicted RBP2.97□□□□□ -1.93
VTI1B-206ENST00000556461 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
VTI1B-206ENST00000556461 C10orf95Q9H7T3 257 aa2.97□□□□□ -1.93
VTI1B-206ENST00000556461 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
VTI1B-206ENST00000556461 SVIPQ8NHG7 77 aa2.95□□□□□ -1.94
VTI1B-206ENST00000556461 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
VTI1B-206ENST00000556461 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
VTI1B-206ENST00000556461 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
VTI1B-206ENST00000556461 TMEM258P61165 79 aa2.92□□□□□ -1.94
VTI1B-206ENST00000556461 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
VTI1B-206ENST00000556461 MT1GP13640 62 aa2.9□□□□□ -1.95
VTI1B-206ENST00000556461 MT1LQ93083 61 aa2.9□□□□□ -1.95
VTI1B-206ENST00000556461 TNP1P09430 55 aa2.89□□□□□ -1.95
VTI1B-206ENST00000556461 MT1MQ8N339 61 aa2.88□□□□□ -1.95
VTI1B-206ENST00000556461 UQCR11O14957 56 aa2.85□□□□□ -1.95
VTI1B-206ENST00000556461 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
VTI1B-206ENST00000556461 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
VTI1B-206ENST00000556461 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
VTI1B-206ENST00000556461 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
VTI1B-206ENST00000556461 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
VTI1B-206ENST00000556461 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
VTI1B-206ENST00000556461 PSPHP1O15172 72 aa2.78□□□□□ -1.96
VTI1B-206ENST00000556461 MT4P47944 62 aa2.75□□□□□ -1.97
VTI1B-206ENST00000556461 Q1T7F1 81 aa2.75□□□□□ -1.97
VTI1B-206ENST00000556461 KRTAP25-1Q3LHN0 102 aa2.73□□□□□ -1.97
VTI1B-206ENST00000556461 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
VTI1B-206ENST00000556461 V9GYY9 64 aa2.73□□□□□ -1.97
VTI1B-206ENST00000556461 K7ERS5 55 aa2.7□□□□□ -1.98
VTI1B-206ENST00000556461 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
VTI1B-206ENST00000556461 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
VTI1B-206ENST00000556461 A6NED7 52 aa2.66□□□□□ -1.98
VTI1B-206ENST00000556461 PCP4P48539 62 aa2.65□□□□□ -1.99
VTI1B-206ENST00000556461 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
VTI1B-206ENST00000556461 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
VTI1B-206ENST00000556461 RPS28P62857 69 aaKnown RBP2.6□□□□□ -1.99
VTI1B-206ENST00000556461 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
VTI1B-206ENST00000556461 CDC42SE1Q9NRR8 79 aa2.58□□□□□ -2
VTI1B-206ENST00000556461 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
VTI1B-206ENST00000556461 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
VTI1B-206ENST00000556461 ROMO1P60602 79 aa2.56□□□□□ -2
VTI1B-206ENST00000556461 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
VTI1B-206ENST00000556461 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
VTI1B-206ENST00000556461 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
VTI1B-206ENST00000556461 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
VTI1B-206ENST00000556461 MT1AP04731 61 aa2.45□□□□□ -2.02
VTI1B-206ENST00000556461 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
VTI1B-206ENST00000556461 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
VTI1B-206ENST00000556461 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
VTI1B-206ENST00000556461 BRK1Q8WUW1 75 aa2.29□□□□□ -2.04
VTI1B-206ENST00000556461 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
VTI1B-206ENST00000556461 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
VTI1B-206ENST00000556461 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
VTI1B-206ENST00000556461 MT3P25713 68 aa2.22□□□□□ -2.05
VTI1B-206ENST00000556461 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
VTI1B-206ENST00000556461 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
VTI1B-206ENST00000556461 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
VTI1B-206ENST00000556461 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
VTI1B-206ENST00000556461 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
VTI1B-206ENST00000556461 PMAIP1Q13794 54 aa2.14□□□□□ -2.07
VTI1B-206ENST00000556461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
VTI1B-206ENST00000556461 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
VTI1B-206ENST00000556461 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
VTI1B-206ENST00000556461 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
VTI1B-206ENST00000556461 PRO0628Q9UI54 55 aa1.96□□□□□ -2.1
VTI1B-206ENST00000556461 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
VTI1B-206ENST00000556461 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
VTI1B-206ENST00000556461 KTN1-AS1Q86SY8 53 aa1.89□□□□□ -2.11
VTI1B-206ENST00000556461 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
VTI1B-206ENST00000556461 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
VTI1B-206ENST00000556461 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
VTI1B-206ENST00000556461 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
VTI1B-206ENST00000556461 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
VTI1B-206ENST00000556461 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
VTI1B-206ENST00000556461 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
VTI1B-206ENST00000556461 PRM1P04553 51 aa1.34□□□□□ -2.19
VTI1B-206ENST00000556461 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
VTI1B-206ENST00000556461 INE1O15225 51 aa1.07□□□□□ -2.24
VTI1B-206ENST00000556461 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 178.2 ms